Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.84□□□□□ -0.19
Trim11Q99PQ2 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Gm12036-201ENSMUST00000120008 530 ntBASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Gm13786-201ENSMUST00000122371 333 ntBASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Gm43118-201ENSMUST00000199149 775 ntBASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Gm5950-201ENSMUST00000213337 772 ntBASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Morn2-202ENSMUST00000227729 656 ntBASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim11Q99PQ2 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim11Q99PQ2 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC13.84□□□□□ -0.19
Trim11Q99PQ2 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Trim11Q99PQ2 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim11Q99PQ2 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Trim11Q99PQ2 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC13.83□□□□□ -0.19
Trim11Q99PQ2 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Trim11Q99PQ2 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
Trim11Q99PQ2 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim11Q99PQ2 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim11Q99PQ2 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim11Q99PQ2 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim11Q99PQ2 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim11Q99PQ2 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim11Q99PQ2 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim11Q99PQ2 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim11Q99PQ2 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim11Q99PQ2 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.83□□□□□ -0.2
Trim11Q99PQ2 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim11Q99PQ2 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim11Q99PQ2 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.83□□□□□ -0.2
Trim11Q99PQ2 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim11Q99PQ2 Gm8062-201ENSMUST00000139696 444 ntBASIC13.83□□□□□ -0.2
Trim11Q99PQ2 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim11Q99PQ2 Gm24845-201ENSMUST00000158034 109 ntBASIC13.83□□□□□ -0.2
Trim11Q99PQ2 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.83□□□□□ -0.2
Trim11Q99PQ2 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim11Q99PQ2 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trim11Q99PQ2 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.83□□□□□ -0.2
Trim11Q99PQ2 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.83□□□□□ -0.2
Trim11Q99PQ2 Gm37489-201ENSMUST00000191883 159 ntBASIC13.83□□□□□ -0.2
Trim11Q99PQ2 AY702102-202ENSMUST00000194651 1173 ntBASIC13.83□□□□□ -0.2
Trim11Q99PQ2 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim11Q99PQ2 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim11Q99PQ2 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim11Q99PQ2 Gm9996-201ENSMUST00000070359 913 ntBASIC13.83□□□□□ -0.2
Trim11Q99PQ2 Gm25857-201ENSMUST00000082788 129 ntBASIC13.83□□□□□ -0.2
Trim11Q99PQ2 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim11Q99PQ2 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.83□□□□□ -0.2
Trim11Q99PQ2 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim11Q99PQ2 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim11Q99PQ2 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim11Q99PQ2 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim11Q99PQ2 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim11Q99PQ2 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim11Q99PQ2 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.83□□□□□ -0.2
Trim11Q99PQ2 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.83□□□□□ -0.2
Trim11Q99PQ2 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.83□□□□□ -0.2
Trim11Q99PQ2 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim11Q99PQ2 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim11Q99PQ2 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Trim11Q99PQ2 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim11Q99PQ2 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Trim11Q99PQ2 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim11Q99PQ2 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trim11Q99PQ2 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim11Q99PQ2 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trim11Q99PQ2 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim11Q99PQ2 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim11Q99PQ2 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms