Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 Gm15352-201ENSMUST00000118696 270 ntBASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 Gm7719-201ENSMUST00000182374 975 ntBASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.62□□□□□ -0.39
Col25a1Q99MQ5 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Gm14724-201ENSMUST00000118400 537 ntBASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Gm12030-201ENSMUST00000121917 223 ntBASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Gm16305-201ENSMUST00000140747 556 ntBASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Gm26957-201ENSMUST00000182645 977 ntBASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Mir6407-201ENSMUST00000184510 101 ntBASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Gm3017-201ENSMUST00000203603 1126 ntBASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Gm6390-201ENSMUST00000215034 589 ntBASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 AC129308.3-201ENSMUST00000225652 524 ntBASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col25a1Q99MQ5 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms