Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Gm12742-201ENSMUST00000117326 410 ntBASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Gm6023-201ENSMUST00000118217 606 ntBASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Gm11964-201ENSMUST00000120982 444 ntBASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Rmrp-201ENSMUST00000157463 271 ntBASIC11.79□□□□□ -0.52
Rnf111Q99ML9 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Gm45880-201ENSMUST00000213041 853 ntBASIC11.79□□□□□ -0.52
Rnf111Q99ML9 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Thoc7-209ENSMUST00000225325 765 ntBASIC11.79□□□□□ -0.52
Rnf111Q99ML9 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.79□□□□□ -0.52
Rnf111Q99ML9 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.79□□□□□ -0.52
Rnf111Q99ML9 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf111Q99ML9 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf111Q99ML9 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Rnf111Q99ML9 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.78□□□□□ -0.52
Rnf111Q99ML9 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf111Q99ML9 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.78□□□□□ -0.52
Rnf111Q99ML9 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf111Q99ML9 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf111Q99ML9 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.78□□□□□ -0.52
Rnf111Q99ML9 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf111Q99ML9 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf111Q99ML9 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Rnf111Q99ML9 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf111Q99ML9 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.78□□□□□ -0.52
Rnf111Q99ML9 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf111Q99ML9 Gm38116-201ENSMUST00000193873 1533 ntBASIC11.78□□□□□ -0.52
Rnf111Q99ML9 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf111Q99ML9 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf111Q99ML9 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Rnf111Q99ML9 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf111Q99ML9 Gm24548-201ENSMUST00000158650 108 ntBASIC11.78□□□□□ -0.52
Rnf111Q99ML9 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf111Q99ML9 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.78□□□□□ -0.52
Rnf111Q99ML9 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.78□□□□□ -0.52
Rnf111Q99ML9 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.78□□□□□ -0.52
Rnf111Q99ML9 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf111Q99ML9 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Rnf111Q99ML9 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf111Q99ML9 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf111Q99ML9 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf111Q99ML9 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf111Q99ML9 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf111Q99ML9 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf111Q99ML9 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf111Q99ML9 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf111Q99ML9 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf111Q99ML9 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf111Q99ML9 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.78□□□□□ -0.52
Rnf111Q99ML9 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Rnf111Q99ML9 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf111Q99ML9 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Rnf111Q99ML9 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf111Q99ML9 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Rnf111Q99ML9 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.77□□□□□ -0.52
Rnf111Q99ML9 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rnf111Q99ML9 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.77□□□□□ -0.52
Rnf111Q99ML9 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Rnf111Q99ML9 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rnf111Q99ML9 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Rnf111Q99ML9 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf111Q99ML9 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf111Q99ML9 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf111Q99ML9 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.77□□□□□ -0.53
Rnf111Q99ML9 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf111Q99ML9 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Rnf111Q99ML9 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.77□□□□□ -0.53
Rnf111Q99ML9 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms