Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tlr3Q99MB1 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tlr3Q99MB1 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tlr3Q99MB1 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Tlr3Q99MB1 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tlr3Q99MB1 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tlr3Q99MB1 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tlr3Q99MB1 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.06□□□□□ -0.32
Tlr3Q99MB1 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.06□□□□□ -0.32
Tlr3Q99MB1 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Tlr3Q99MB1 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tlr3Q99MB1 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tlr3Q99MB1 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.05□□□□□ -0.32
Tlr3Q99MB1 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tlr3Q99MB1 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tlr3Q99MB1 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tlr3Q99MB1 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tlr3Q99MB1 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tlr3Q99MB1 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tlr3Q99MB1 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tlr3Q99MB1 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tlr3Q99MB1 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tlr3Q99MB1 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Tlr3Q99MB1 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tlr3Q99MB1 Gm11930-201ENSMUST00000117788 190 ntBASIC13.05□□□□□ -0.32
Tlr3Q99MB1 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC13.05□□□□□ -0.32
Tlr3Q99MB1 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.05□□□□□ -0.32
Tlr3Q99MB1 Gm14277-201ENSMUST00000121195 360 ntBASIC13.05□□□□□ -0.32
Tlr3Q99MB1 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tlr3Q99MB1 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tlr3Q99MB1 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Tlr3Q99MB1 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.05□□□□□ -0.32
Tlr3Q99MB1 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tlr3Q99MB1 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC13.05□□□□□ -0.32
Tlr3Q99MB1 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tlr3Q99MB1 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tlr3Q99MB1 Gm19994-201ENSMUST00000217086 586 ntBASIC13.05□□□□□ -0.32
Tlr3Q99MB1 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tlr3Q99MB1 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tlr3Q99MB1 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tlr3Q99MB1 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC13.05□□□□□ -0.32
Tlr3Q99MB1 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Tlr3Q99MB1 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tlr3Q99MB1 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tlr3Q99MB1 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tlr3Q99MB1 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.05□□□□□ -0.32
Tlr3Q99MB1 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tlr3Q99MB1 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.05□□□□□ -0.32
Tlr3Q99MB1 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Tlr3Q99MB1 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tlr3Q99MB1 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tlr3Q99MB1 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tlr3Q99MB1 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tlr3Q99MB1 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.05□□□□□ -0.32
Tlr3Q99MB1 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tlr3Q99MB1 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tlr3Q99MB1 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Gm15276-201ENSMUST00000145953 498 ntBASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Gm22902-201ENSMUST00000158488 302 ntBASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Gm13097-201ENSMUST00000210722 397 ntBASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tlr3Q99MB1 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms