Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Gm11949-201ENSMUST00000117640 372 ntBASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Mir1956-201ENSMUST00000157748 65 ntBASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Gm23218-201ENSMUST00000158124 276 ntBASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Gm43930-201ENSMUST00000203868 845 ntBASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Gm44980-201ENSMUST00000205826 314 ntBASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Gm18041-201ENSMUST00000218210 618 ntBASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx6-1Q99MA9 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Gm26286-201ENSMUST00000104166 134 ntBASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Gm15595-201ENSMUST00000120840 961 ntBASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Gm15566-201ENSMUST00000121130 590 ntBASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Gm22442-201ENSMUST00000157256 144 ntBASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Gm22877-201ENSMUST00000175451 105 ntBASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Gm37102-201ENSMUST00000195740 1105 ntBASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 n-R5s211-201ENSMUST00000093689 119 ntBASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Nkx6-1Q99MA9 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.42□□□□□ -0.58
Nkx6-1Q99MA9 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms