Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm13668-201ENSMUST00000119237 1001 ntBASIC12.81□□□□□ -0.36
Clp1Q99LI9 Gm13937-201ENSMUST00000121000 988 ntBASIC12.81□□□□□ -0.36
Clp1Q99LI9 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.81□□□□□ -0.36
Clp1Q99LI9 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.81□□□□□ -0.36
Clp1Q99LI9 Gm23218-201ENSMUST00000158124 276 ntBASIC12.81□□□□□ -0.36
Clp1Q99LI9 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.81□□□□□ -0.36
Clp1Q99LI9 Gm17877-201ENSMUST00000192578 814 ntBASIC12.81□□□□□ -0.36
Clp1Q99LI9 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Clp1Q99LI9 Gm44158-201ENSMUST00000203881 505 ntBASIC12.81□□□□□ -0.36
Clp1Q99LI9 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.81□□□□□ -0.36
Clp1Q99LI9 Gm44506-201ENSMUST00000206278 965 ntBASIC12.81□□□□□ -0.36
Clp1Q99LI9 Gm2553-201ENSMUST00000215986 605 ntBASIC12.81□□□□□ -0.36
Clp1Q99LI9 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.81□□□□□ -0.36
Clp1Q99LI9 AC124433.1-201ENSMUST00000224483 1063 ntBASIC12.81□□□□□ -0.36
Clp1Q99LI9 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC12.81□□□□□ -0.36
Clp1Q99LI9 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clp1Q99LI9 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clp1Q99LI9 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Clp1Q99LI9 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clp1Q99LI9 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clp1Q99LI9 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.81□□□□□ -0.36
Clp1Q99LI9 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clp1Q99LI9 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clp1Q99LI9 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clp1Q99LI9 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clp1Q99LI9 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clp1Q99LI9 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Clp1Q99LI9 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clp1Q99LI9 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.81□□□□□ -0.36
Clp1Q99LI9 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.81□□□□□ -0.36
Clp1Q99LI9 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clp1Q99LI9 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clp1Q99LI9 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.8□□□□□ -0.36
Clp1Q99LI9 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clp1Q99LI9 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.8□□□□□ -0.36
Clp1Q99LI9 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Clp1Q99LI9 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Clp1Q99LI9 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clp1Q99LI9 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clp1Q99LI9 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.8□□□□□ -0.36
Clp1Q99LI9 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clp1Q99LI9 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Clp1Q99LI9 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.8□□□□□ -0.36
Clp1Q99LI9 Grk6-205ENSMUST00000224653 2976 ntBASIC12.8□□□□□ -0.36
Clp1Q99LI9 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clp1Q99LI9 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clp1Q99LI9 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clp1Q99LI9 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clp1Q99LI9 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.8□□□□□ -0.36
Clp1Q99LI9 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Clp1Q99LI9 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clp1Q99LI9 Gm26013-201ENSMUST00000104404 119 ntBASIC12.8□□□□□ -0.36
Clp1Q99LI9 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clp1Q99LI9 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Clp1Q99LI9 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.8□□□□□ -0.36
Clp1Q99LI9 Gm14942-201ENSMUST00000119642 336 ntBASIC12.8□□□□□ -0.36
Clp1Q99LI9 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Clp1Q99LI9 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC12.8□□□□□ -0.36
Clp1Q99LI9 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC12.8□□□□□ -0.36
Clp1Q99LI9 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Clp1Q99LI9 AC154634.3-201ENSMUST00000224589 736 ntBASIC12.8□□□□□ -0.36
Clp1Q99LI9 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.8□□□□□ -0.36
Clp1Q99LI9 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clp1Q99LI9 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Clp1Q99LI9 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.8□□□□□ -0.36
Clp1Q99LI9 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Clp1Q99LI9 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.8□□□□□ -0.36
Clp1Q99LI9 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clp1Q99LI9 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.8□□□□□ -0.36
Clp1Q99LI9 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clp1Q99LI9 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clp1Q99LI9 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Clp1Q99LI9 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC12.8□□□□□ -0.36
Clp1Q99LI9 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Clp1Q99LI9 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clp1Q99LI9 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clp1Q99LI9 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clp1Q99LI9 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clp1Q99LI9 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.79□□□□□ -0.36
Clp1Q99LI9 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clp1Q99LI9 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clp1Q99LI9 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clp1Q99LI9 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clp1Q99LI9 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.79□□□□□ -0.36
Clp1Q99LI9 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.79□□□□□ -0.36
Clp1Q99LI9 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clp1Q99LI9 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Clp1Q99LI9 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clp1Q99LI9 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clp1Q99LI9 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clp1Q99LI9 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Clp1Q99LI9 Gm25076-201ENSMUST00000104098 132 ntBASIC12.79□□□□□ -0.36
Clp1Q99LI9 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clp1Q99LI9 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clp1Q99LI9 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC12.79□□□□□ -0.36
Clp1Q99LI9 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.79□□□□□ -0.36
Clp1Q99LI9 Gm18367-201ENSMUST00000176139 600 ntBASIC12.79□□□□□ -0.36
Clp1Q99LI9 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clp1Q99LI9 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.79□□□□□ -0.36
Clp1Q99LI9 Gm12407-201ENSMUST00000180219 324 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms