Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cstf3Q99LI7 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.75□□□□□ -0.53
Cstf3Q99LI7 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Gm22018-201ENSMUST00000104357 131 ntBASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Gm13875-201ENSMUST00000120162 282 ntBASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Gm42693-201ENSMUST00000196779 631 ntBASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Gm42937-201ENSMUST00000197360 752 ntBASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cstf3Q99LI7 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.75□□□□□ -0.53
Cstf3Q99LI7 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cstf3Q99LI7 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cstf3Q99LI7 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cstf3Q99LI7 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cstf3Q99LI7 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cstf3Q99LI7 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cstf3Q99LI7 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cstf3Q99LI7 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cstf3Q99LI7 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Cstf3Q99LI7 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.74□□□□□ -0.53
Cstf3Q99LI7 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cstf3Q99LI7 Gm23931-201ENSMUST00000103842 109 ntBASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms