Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.08□□□□□ -0.64
Lims1Q99JW4 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.08□□□□□ -0.64
Lims1Q99JW4 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lims1Q99JW4 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lims1Q99JW4 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Lims1Q99JW4 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lims1Q99JW4 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lims1Q99JW4 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lims1Q99JW4 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Lims1Q99JW4 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lims1Q99JW4 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lims1Q99JW4 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lims1Q99JW4 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Lims1Q99JW4 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Lims1Q99JW4 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.07□□□□□ -0.64
Lims1Q99JW4 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Gm12058-201ENSMUST00000118614 437 ntBASIC11.07□□□□□ -0.64
Lims1Q99JW4 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Gm16379-201ENSMUST00000161469 348 ntBASIC11.07□□□□□ -0.64
Lims1Q99JW4 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Gm8762-201ENSMUST00000193486 339 ntBASIC11.07□□□□□ -0.64
Lims1Q99JW4 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Gm10478-201ENSMUST00000084451 396 ntBASIC11.07□□□□□ -0.64
Lims1Q99JW4 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lims1Q99JW4 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lims1Q99JW4 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lims1Q99JW4 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lims1Q99JW4 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Lims1Q99JW4 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lims1Q99JW4 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.06□□□□□ -0.64
Lims1Q99JW4 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lims1Q99JW4 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.06□□□□□ -0.64
Lims1Q99JW4 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.06□□□□□ -0.64
Lims1Q99JW4 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lims1Q99JW4 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Lims1Q99JW4 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Lims1Q99JW4 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lims1Q99JW4 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Lims1Q99JW4 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Lims1Q99JW4 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lims1Q99JW4 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lims1Q99JW4 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.06□□□□□ -0.64
Lims1Q99JW4 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.06□□□□□ -0.64
Lims1Q99JW4 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lims1Q99JW4 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.06□□□□□ -0.64
Lims1Q99JW4 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lims1Q99JW4 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.06□□□□□ -0.64
Lims1Q99JW4 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.06□□□□□ -0.64
Lims1Q99JW4 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lims1Q99JW4 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lims1Q99JW4 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.06□□□□□ -0.64
Lims1Q99JW4 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lims1Q99JW4 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lims1Q99JW4 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lims1Q99JW4 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lims1Q99JW4 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lims1Q99JW4 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms