Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.62□□□□□ -0.39
Pcdhb1Q91Y08 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb1Q91Y08 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb1Q91Y08 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdhb1Q91Y08 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb1Q91Y08 Gm15198-201ENSMUST00000117283 177 ntBASIC12.62□□□□□ -0.39
Pcdhb1Q91Y08 Gm11930-201ENSMUST00000117788 190 ntBASIC12.62□□□□□ -0.39
Pcdhb1Q91Y08 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.62□□□□□ -0.39
Pcdhb1Q91Y08 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.62□□□□□ -0.39
Pcdhb1Q91Y08 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.62□□□□□ -0.39
Pcdhb1Q91Y08 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.62□□□□□ -0.39
Pcdhb1Q91Y08 Gm9230-201ENSMUST00000188228 532 ntBASIC12.62□□□□□ -0.39
Pcdhb1Q91Y08 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb1Q91Y08 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb1Q91Y08 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pcdhb1Q91Y08 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb1Q91Y08 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb1Q91Y08 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb1Q91Y08 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb1Q91Y08 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdhb1Q91Y08 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb1Q91Y08 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Pcdhb1Q91Y08 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb1Q91Y08 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb1Q91Y08 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 Gm5706-201ENSMUST00000181525 993 ntBASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 Mir8109-201ENSMUST00000184375 117 ntBASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb1Q91Y08 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Gm38266-201ENSMUST00000194931 421 ntBASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Gm45865-201ENSMUST00000211815 945 ntBASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Cts7-204ENSMUST00000225321 1257 ntBASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb1Q91Y08 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms