Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp3Q91W36 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Usp3Q91W36 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.63□□□□□ -0.39
Usp3Q91W36 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp3Q91W36 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usp3Q91W36 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp3Q91W36 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Usp3Q91W36 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp3Q91W36 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.62□□□□□ -0.39
Usp3Q91W36 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp3Q91W36 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp3Q91W36 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usp3Q91W36 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.62□□□□□ -0.39
Usp3Q91W36 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp3Q91W36 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp3Q91W36 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usp3Q91W36 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Usp3Q91W36 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Usp3Q91W36 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp3Q91W36 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Usp3Q91W36 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.62□□□□□ -0.39
Usp3Q91W36 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.62□□□□□ -0.39
Usp3Q91W36 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Usp3Q91W36 Gm12997-201ENSMUST00000120207 640 ntBASIC12.62□□□□□ -0.39
Usp3Q91W36 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usp3Q91W36 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Usp3Q91W36 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.62□□□□□ -0.39
Usp3Q91W36 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.62□□□□□ -0.39
Usp3Q91W36 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.62□□□□□ -0.39
Usp3Q91W36 Gm37215-201ENSMUST00000194927 1259 ntBASIC12.62□□□□□ -0.39
Usp3Q91W36 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Usp3Q91W36 Gm18711-201ENSMUST00000199341 750 ntBASIC12.62□□□□□ -0.39
Usp3Q91W36 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.62□□□□□ -0.39
Usp3Q91W36 Gm18212-201ENSMUST00000211678 889 ntBASIC12.62□□□□□ -0.39
Usp3Q91W36 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usp3Q91W36 Gm5178-201ENSMUST00000219380 898 ntBASIC12.62□□□□□ -0.39
Usp3Q91W36 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC12.62□□□□□ -0.39
Usp3Q91W36 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.62□□□□□ -0.39
Usp3Q91W36 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC12.62□□□□□ -0.39
Usp3Q91W36 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp3Q91W36 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp3Q91W36 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Usp3Q91W36 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Usp3Q91W36 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp3Q91W36 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp3Q91W36 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp3Q91W36 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.62□□□□□ -0.39
Usp3Q91W36 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp3Q91W36 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Usp3Q91W36 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp3Q91W36 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Usp3Q91W36 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Usp3Q91W36 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp3Q91W36 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp3Q91W36 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp3Q91W36 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp3Q91W36 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usp3Q91W36 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usp3Q91W36 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp3Q91W36 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.62□□□□□ -0.39
Usp3Q91W36 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.62□□□□□ -0.39
Usp3Q91W36 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.62□□□□□ -0.39
Usp3Q91W36 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp3Q91W36 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp3Q91W36 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp3Q91W36 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Usp3Q91W36 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp3Q91W36 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp3Q91W36 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp3Q91W36 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp3Q91W36 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.61□□□□□ -0.39
Usp3Q91W36 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp3Q91W36 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp3Q91W36 Gm23912-201ENSMUST00000104687 87 ntBASIC12.61□□□□□ -0.39
Usp3Q91W36 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Usp3Q91W36 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp3Q91W36 Gm12001-201ENSMUST00000121727 913 ntBASIC12.61□□□□□ -0.39
Usp3Q91W36 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usp3Q91W36 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usp3Q91W36 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Usp3Q91W36 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.61□□□□□ -0.39
Usp3Q91W36 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.61□□□□□ -0.39
Usp3Q91W36 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
Usp3Q91W36 Gm21190-202ENSMUST00000196384 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp3Q91W36 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Usp3Q91W36 Gm42599-201ENSMUST00000201308 469 ntBASIC12.61□□□□□ -0.39
Usp3Q91W36 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.61□□□□□ -0.39
Usp3Q91W36 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.61□□□□□ -0.39
Usp3Q91W36 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usp3Q91W36 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.61□□□□□ -0.39
Usp3Q91W36 AC154730.1-201ENSMUST00000227874 816 ntBASIC12.61□□□□□ -0.39
Usp3Q91W36 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC12.61□□□□□ -0.39
Usp3Q91W36 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp3Q91W36 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp3Q91W36 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp3Q91W36 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Usp3Q91W36 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp3Q91W36 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Usp3Q91W36 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.61□□□□□ -0.39
Usp3Q91W36 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms