Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trim60Q8VI40 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.56□□□□□ -0.4
Trim60Q8VI40 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.56□□□□□ -0.4
Trim60Q8VI40 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim60Q8VI40 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.56□□□□□ -0.4
Trim60Q8VI40 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim60Q8VI40 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trim60Q8VI40 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim60Q8VI40 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim60Q8VI40 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim60Q8VI40 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim60Q8VI40 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim60Q8VI40 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim60Q8VI40 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim60Q8VI40 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim60Q8VI40 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.56□□□□□ -0.4
Trim60Q8VI40 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trim60Q8VI40 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim60Q8VI40 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.56□□□□□ -0.4
Trim60Q8VI40 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim60Q8VI40 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim60Q8VI40 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trim60Q8VI40 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim60Q8VI40 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim60Q8VI40 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Trim60Q8VI40 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim60Q8VI40 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trim60Q8VI40 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.55□□□□□ -0.4
Trim60Q8VI40 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Trim60Q8VI40 Rgr-203ENSMUST00000225070 4704 ntBASIC12.55□□□□□ -0.4
Trim60Q8VI40 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim60Q8VI40 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.55□□□□□ -0.4
Trim60Q8VI40 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim60Q8VI40 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim60Q8VI40 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim60Q8VI40 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trim60Q8VI40 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim60Q8VI40 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trim60Q8VI40 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim60Q8VI40 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim60Q8VI40 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim60Q8VI40 Gm13570-201ENSMUST00000140763 309 ntBASIC12.55□□□□□ -0.4
Trim60Q8VI40 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.55□□□□□ -0.4
Trim60Q8VI40 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim60Q8VI40 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim60Q8VI40 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trim60Q8VI40 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Trim60Q8VI40 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.55□□□□□ -0.4
Trim60Q8VI40 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.55□□□□□ -0.4
Trim60Q8VI40 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.55□□□□□ -0.4
Trim60Q8VI40 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.55□□□□□ -0.4
Trim60Q8VI40 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim60Q8VI40 Snora73a-201ENSMUST00000082453 205 ntBASIC12.55□□□□□ -0.4
Trim60Q8VI40 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim60Q8VI40 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim60Q8VI40 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim60Q8VI40 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim60Q8VI40 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim60Q8VI40 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trim60Q8VI40 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.55□□□□□ -0.4
Trim60Q8VI40 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim60Q8VI40 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trim60Q8VI40 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim60Q8VI40 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim60Q8VI40 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim60Q8VI40 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim60Q8VI40 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trim60Q8VI40 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.55□□□□□ -0.4
Trim60Q8VI40 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trim60Q8VI40 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim60Q8VI40 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim60Q8VI40 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim60Q8VI40 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.54□□□□□ -0.4
Trim60Q8VI40 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.54□□□□□ -0.4
Trim60Q8VI40 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Gm12390-201ENSMUST00000117897 397 ntBASIC12.54□□□□□ -0.4
Trim60Q8VI40 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.54□□□□□ -0.4
Trim60Q8VI40 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Gm6222-202ENSMUST00000182143 629 ntBASIC12.54□□□□□ -0.4
Trim60Q8VI40 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Gm18711-201ENSMUST00000199341 750 ntBASIC12.54□□□□□ -0.4
Trim60Q8VI40 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim60Q8VI40 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms