Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Gm11531-201ENSMUST00000117614 555 ntBASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Gm14704-201ENSMUST00000120300 874 ntBASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Gm27046-201ENSMUST00000182160 463 ntBASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Gm37986-201ENSMUST00000193285 383 ntBASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Gm44967-201ENSMUST00000207047 631 ntBASIC11.12□□□□□ -0.63
Nkd2Q8VE28 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkd2Q8VE28 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkd2Q8VE28 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkd2Q8VE28 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkd2Q8VE28 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Nkd2Q8VE28 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Nkd2Q8VE28 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkd2Q8VE28 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.11□□□□□ -0.63
Nkd2Q8VE28 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkd2Q8VE28 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkd2Q8VE28 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkd2Q8VE28 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkd2Q8VE28 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkd2Q8VE28 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkd2Q8VE28 Gm14277-201ENSMUST00000121195 360 ntBASIC11.11□□□□□ -0.63
Nkd2Q8VE28 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkd2Q8VE28 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.11□□□□□ -0.63
Nkd2Q8VE28 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Nkd2Q8VE28 Gm23363-201ENSMUST00000175024 79 ntBASIC11.11□□□□□ -0.63
Nkd2Q8VE28 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkd2Q8VE28 Gm3096-201ENSMUST00000185770 364 ntBASIC11.11□□□□□ -0.63
Nkd2Q8VE28 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.11□□□□□ -0.63
Nkd2Q8VE28 AA914427-201ENSMUST00000193194 1166 ntBASIC11.11□□□□□ -0.63
Nkd2Q8VE28 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.11□□□□□ -0.63
Nkd2Q8VE28 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.11□□□□□ -0.63
Nkd2Q8VE28 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.11□□□□□ -0.63
Nkd2Q8VE28 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Nkd2Q8VE28 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkd2Q8VE28 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkd2Q8VE28 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkd2Q8VE28 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkd2Q8VE28 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkd2Q8VE28 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkd2Q8VE28 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkd2Q8VE28 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkd2Q8VE28 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Nkd2Q8VE28 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkd2Q8VE28 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkd2Q8VE28 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkd2Q8VE28 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkd2Q8VE28 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkd2Q8VE28 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.1□□□□□ -0.63
Nkd2Q8VE28 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkd2Q8VE28 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkd2Q8VE28 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkd2Q8VE28 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkd2Q8VE28 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.1□□□□□ -0.63
Nkd2Q8VE28 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.1□□□□□ -0.63
Nkd2Q8VE28 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Nkd2Q8VE28 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkd2Q8VE28 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkd2Q8VE28 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkd2Q8VE28 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkd2Q8VE28 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkd2Q8VE28 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkd2Q8VE28 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkd2Q8VE28 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms