Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Gm45496-201ENSMUST00000209918 2917 ntBASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nup35Q8R4R6 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Gm3287-205ENSMUST00000228893 1332 ntBASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Mir692-1-201ENSMUST00000102263 109 ntBASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Gm7488-201ENSMUST00000117148 684 ntBASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Gm15172-201ENSMUST00000118945 1046 ntBASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Gm6473-201ENSMUST00000188572 1210 ntBASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 AC159006.1-201ENSMUST00000226396 258 ntBASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Nup35Q8R4R6 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Gm2606-201ENSMUST00000100754 1002 ntBASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Gm12286-201ENSMUST00000119246 1002 ntBASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms