Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Sf3a1Q8K4Z5 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3a1Q8K4Z5 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3a1Q8K4Z5 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Sf3a1Q8K4Z5 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.87□□□□□ -0.03
Sf3a1Q8K4Z5 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3a1Q8K4Z5 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3a1Q8K4Z5 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3a1Q8K4Z5 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3a1Q8K4Z5 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3a1Q8K4Z5 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3a1Q8K4Z5 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Sf3a1Q8K4Z5 AC123857.2-201ENSMUST00000225756 1582 ntBASIC14.87□□□□□ -0.03
Sf3a1Q8K4Z5 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.87□□□□□ -0.03
Sf3a1Q8K4Z5 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3a1Q8K4Z5 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3a1Q8K4Z5 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3a1Q8K4Z5 Gm11989-201ENSMUST00000117240 672 ntBASIC14.87□□□□□ -0.03
Sf3a1Q8K4Z5 Gm11362-201ENSMUST00000118838 850 ntBASIC14.87□□□□□ -0.03
Sf3a1Q8K4Z5 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3a1Q8K4Z5 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.87□□□□□ -0.03
Sf3a1Q8K4Z5 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.87□□□□□ -0.03
Sf3a1Q8K4Z5 Gm4857-201ENSMUST00000192718 785 ntBASIC14.87□□□□□ -0.03
Sf3a1Q8K4Z5 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3a1Q8K4Z5 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3a1Q8K4Z5 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Sf3a1Q8K4Z5 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3a1Q8K4Z5 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3a1Q8K4Z5 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC14.87□□□□□ -0.03
Sf3a1Q8K4Z5 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3a1Q8K4Z5 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3a1Q8K4Z5 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3a1Q8K4Z5 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3a1Q8K4Z5 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3a1Q8K4Z5 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3a1Q8K4Z5 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3a1Q8K4Z5 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3a1Q8K4Z5 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3a1Q8K4Z5 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Sf3a1Q8K4Z5 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3a1Q8K4Z5 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3a1Q8K4Z5 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3a1Q8K4Z5 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.86□□□□□ -0.03
Sf3a1Q8K4Z5 Mir877-201ENSMUST00000104738 85 ntBASIC14.86□□□□□ -0.03
Sf3a1Q8K4Z5 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Sf3a1Q8K4Z5 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.86□□□□□ -0.03
Sf3a1Q8K4Z5 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Sf3a1Q8K4Z5 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.86□□□□□ -0.03
Sf3a1Q8K4Z5 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3a1Q8K4Z5 Gm38241-201ENSMUST00000192641 898 ntBASIC14.86□□□□□ -0.03
Sf3a1Q8K4Z5 Gm38319-201ENSMUST00000194537 1266 ntBASIC14.86□□□□□ -0.03
Sf3a1Q8K4Z5 Gm5869-201ENSMUST00000200248 1257 ntBASIC14.86□□□□□ -0.03
Sf3a1Q8K4Z5 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.86□□□□□ -0.03
Sf3a1Q8K4Z5 Gm45224-201ENSMUST00000208203 414 ntBASIC14.86□□□□□ -0.03
Sf3a1Q8K4Z5 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3a1Q8K4Z5 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.86□□□□□ -0.03
Sf3a1Q8K4Z5 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3a1Q8K4Z5 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Sf3a1Q8K4Z5 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3a1Q8K4Z5 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3a1Q8K4Z5 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3a1Q8K4Z5 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3a1Q8K4Z5 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3a1Q8K4Z5 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Sf3a1Q8K4Z5 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3a1Q8K4Z5 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3a1Q8K4Z5 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3a1Q8K4Z5 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3a1Q8K4Z5 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3a1Q8K4Z5 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3a1Q8K4Z5 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3a1Q8K4Z5 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Sf3a1Q8K4Z5 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3a1Q8K4Z5 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Sf3a1Q8K4Z5 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3a1Q8K4Z5 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3a1Q8K4Z5 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3a1Q8K4Z5 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3a1Q8K4Z5 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Sf3a1Q8K4Z5 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Sf3a1Q8K4Z5 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
Sf3a1Q8K4Z5 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3a1Q8K4Z5 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC14.85□□□□□ -0.03
Sf3a1Q8K4Z5 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.85□□□□□ -0.03
Sf3a1Q8K4Z5 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.85□□□□□ -0.03
Sf3a1Q8K4Z5 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.85□□□□□ -0.03
Sf3a1Q8K4Z5 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC14.85□□□□□ -0.03
Sf3a1Q8K4Z5 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3a1Q8K4Z5 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3a1Q8K4Z5 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3a1Q8K4Z5 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Sf3a1Q8K4Z5 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3a1Q8K4Z5 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.85□□□□□ -0.03
Sf3a1Q8K4Z5 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.85□□□□□ -0.03
Sf3a1Q8K4Z5 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3a1Q8K4Z5 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3a1Q8K4Z5 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3a1Q8K4Z5 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Sf3a1Q8K4Z5 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms