Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cchcr1Q8K2I2 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cchcr1Q8K2I2 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC14.35□□□□□ -0.11
Cchcr1Q8K2I2 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC14.35□□□□□ -0.11
Cchcr1Q8K2I2 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cchcr1Q8K2I2 AC108858.2-201ENSMUST00000228186 1425 ntBASIC14.35□□□□□ -0.11
Cchcr1Q8K2I2 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cchcr1Q8K2I2 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Cchcr1Q8K2I2 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cchcr1Q8K2I2 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cchcr1Q8K2I2 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cchcr1Q8K2I2 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.35□□□□□ -0.11
Cchcr1Q8K2I2 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cchcr1Q8K2I2 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC14.35□□□□□ -0.11
Cchcr1Q8K2I2 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cchcr1Q8K2I2 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cchcr1Q8K2I2 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cchcr1Q8K2I2 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cchcr1Q8K2I2 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC14.35□□□□□ -0.11
Cchcr1Q8K2I2 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cchcr1Q8K2I2 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cchcr1Q8K2I2 AC138329.2-201ENSMUST00000225579 1842 ntBASIC14.35□□□□□ -0.11
Cchcr1Q8K2I2 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.35□□□□□ -0.11
Cchcr1Q8K2I2 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cchcr1Q8K2I2 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.35□□□□□ -0.11
Cchcr1Q8K2I2 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC14.35□□□□□ -0.11
Cchcr1Q8K2I2 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC14.35□□□□□ -0.11
Cchcr1Q8K2I2 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cchcr1Q8K2I2 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cchcr1Q8K2I2 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cchcr1Q8K2I2 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.35□□□□□ -0.11
Cchcr1Q8K2I2 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cchcr1Q8K2I2 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cchcr1Q8K2I2 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cchcr1Q8K2I2 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cchcr1Q8K2I2 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 Gm23931-201ENSMUST00000103842 109 ntBASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 Rprl1-201ENSMUST00000158050 327 ntBASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 Gm43172-201ENSMUST00000202139 2137 ntBASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 Gm19963-201ENSMUST00000208413 1255 ntBASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 Gm9996-201ENSMUST00000070359 913 ntBASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cchcr1Q8K2I2 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms