Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rfwd3Q8CIK8 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rfwd3Q8CIK8 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.46□□□□□ -0.58
Rfwd3Q8CIK8 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rfwd3Q8CIK8 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rfwd3Q8CIK8 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.46□□□□□ -0.58
Rfwd3Q8CIK8 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rfwd3Q8CIK8 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.46□□□□□ -0.58
Rfwd3Q8CIK8 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rfwd3Q8CIK8 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rfwd3Q8CIK8 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 Gm13350-201ENSMUST00000120519 479 ntBASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 Gm20482-202ENSMUST00000174729 825 ntBASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 Gm7584-201ENSMUST00000175829 940 ntBASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 Gm3096-201ENSMUST00000185770 364 ntBASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rfwd3Q8CIK8 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 Gm8885-201ENSMUST00000189382 598 ntBASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rfwd3Q8CIK8 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms