Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CopaQ8CIE6 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CopaQ8CIE6 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CopaQ8CIE6 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CopaQ8CIE6 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CopaQ8CIE6 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.44□□□□□ -0.42
CopaQ8CIE6 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CopaQ8CIE6 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.44□□□□□ -0.42
CopaQ8CIE6 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
CopaQ8CIE6 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CopaQ8CIE6 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CopaQ8CIE6 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CopaQ8CIE6 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CopaQ8CIE6 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CopaQ8CIE6 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CopaQ8CIE6 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CopaQ8CIE6 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CopaQ8CIE6 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CopaQ8CIE6 Gm15276-201ENSMUST00000145953 498 ntBASIC12.44□□□□□ -0.42
CopaQ8CIE6 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CopaQ8CIE6 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
CopaQ8CIE6 Mir7070-201ENSMUST00000183657 86 ntBASIC12.44□□□□□ -0.42
CopaQ8CIE6 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.44□□□□□ -0.42
CopaQ8CIE6 Gm8885-201ENSMUST00000189382 598 ntBASIC12.44□□□□□ -0.42
CopaQ8CIE6 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.44□□□□□ -0.42
CopaQ8CIE6 Gm5363-201ENSMUST00000211927 938 ntBASIC12.44□□□□□ -0.42
CopaQ8CIE6 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.44□□□□□ -0.42
CopaQ8CIE6 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.44□□□□□ -0.42
CopaQ8CIE6 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CopaQ8CIE6 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CopaQ8CIE6 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CopaQ8CIE6 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CopaQ8CIE6 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
CopaQ8CIE6 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CopaQ8CIE6 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CopaQ8CIE6 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CopaQ8CIE6 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CopaQ8CIE6 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CopaQ8CIE6 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CopaQ8CIE6 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.44□□□□□ -0.42
CopaQ8CIE6 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CopaQ8CIE6 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CopaQ8CIE6 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CopaQ8CIE6 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.44□□□□□ -0.42
CopaQ8CIE6 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CopaQ8CIE6 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CopaQ8CIE6 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
CopaQ8CIE6 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CopaQ8CIE6 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopaQ8CIE6 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopaQ8CIE6 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.43□□□□□ -0.42
CopaQ8CIE6 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopaQ8CIE6 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopaQ8CIE6 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopaQ8CIE6 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopaQ8CIE6 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CopaQ8CIE6 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CopaQ8CIE6 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CopaQ8CIE6 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopaQ8CIE6 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopaQ8CIE6 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopaQ8CIE6 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopaQ8CIE6 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopaQ8CIE6 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopaQ8CIE6 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopaQ8CIE6 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CopaQ8CIE6 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopaQ8CIE6 Gm8018-201ENSMUST00000173536 789 ntBASIC12.43□□□□□ -0.42
CopaQ8CIE6 Gm27046-201ENSMUST00000182160 463 ntBASIC12.43□□□□□ -0.42
CopaQ8CIE6 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.43□□□□□ -0.42
CopaQ8CIE6 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CopaQ8CIE6 Gm8712-201ENSMUST00000221090 701 ntBASIC12.43□□□□□ -0.42
CopaQ8CIE6 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopaQ8CIE6 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopaQ8CIE6 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
CopaQ8CIE6 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.43□□□□□ -0.42
CopaQ8CIE6 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopaQ8CIE6 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopaQ8CIE6 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.43□□□□□ -0.42
CopaQ8CIE6 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopaQ8CIE6 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopaQ8CIE6 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopaQ8CIE6 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CopaQ8CIE6 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CopaQ8CIE6 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CopaQ8CIE6 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CopaQ8CIE6 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CopaQ8CIE6 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CopaQ8CIE6 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CopaQ8CIE6 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.42□□□□□ -0.42
CopaQ8CIE6 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CopaQ8CIE6 Gm13813-201ENSMUST00000120998 787 ntBASIC12.42□□□□□ -0.42
CopaQ8CIE6 Gm14017-201ENSMUST00000121934 386 ntBASIC12.42□□□□□ -0.42
CopaQ8CIE6 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CopaQ8CIE6 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CopaQ8CIE6 Gm3096-201ENSMUST00000185770 364 ntBASIC12.42□□□□□ -0.42
CopaQ8CIE6 Gm37201-201ENSMUST00000191845 523 ntBASIC12.42□□□□□ -0.42
CopaQ8CIE6 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.42□□□□□ -0.42
CopaQ8CIE6 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.42□□□□□ -0.42
CopaQ8CIE6 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 110.7 ms