Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm32025-201ENSMUST00000217960 307 ntBASIC12.02□□□□□ -0.49
Ccdc28bQ8CEG5 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.02□□□□□ -0.49
Ccdc28bQ8CEG5 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc28bQ8CEG5 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc28bQ8CEG5 Gm15823-201ENSMUST00000064305 670 ntBASIC12.02□□□□□ -0.49
Ccdc28bQ8CEG5 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ccdc28bQ8CEG5 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Ccdc28bQ8CEG5 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc28bQ8CEG5 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc28bQ8CEG5 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc28bQ8CEG5 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.02□□□□□ -0.49
Ccdc28bQ8CEG5 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc28bQ8CEG5 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ccdc28bQ8CEG5 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc28bQ8CEG5 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Ccdc28bQ8CEG5 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc28bQ8CEG5 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc28bQ8CEG5 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc28bQ8CEG5 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Ccdc28bQ8CEG5 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc28bQ8CEG5 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc28bQ8CEG5 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc28bQ8CEG5 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Gm27243-201ENSMUST00000183964 521 ntBASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc28bQ8CEG5 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Gm14057-201ENSMUST00000120631 482 ntBASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Gm11964-201ENSMUST00000120982 444 ntBASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Gm7287-201ENSMUST00000205267 602 ntBASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Gm4768-201ENSMUST00000206199 686 ntBASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms