Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nup88Q8CEC0 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Nup88Q8CEC0 Gm24231-201ENSMUST00000104315 133 ntBASIC14.35□□□□□ -0.11
Nup88Q8CEC0 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup88Q8CEC0 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup88Q8CEC0 Gm12058-201ENSMUST00000118614 437 ntBASIC14.35□□□□□ -0.11
Nup88Q8CEC0 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nup88Q8CEC0 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.35□□□□□ -0.11
Nup88Q8CEC0 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nup88Q8CEC0 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC14.35□□□□□ -0.11
Nup88Q8CEC0 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nup88Q8CEC0 AA914427-201ENSMUST00000193194 1166 ntBASIC14.35□□□□□ -0.11
Nup88Q8CEC0 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC14.35□□□□□ -0.11
Nup88Q8CEC0 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup88Q8CEC0 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup88Q8CEC0 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup88Q8CEC0 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC14.35□□□□□ -0.11
Nup88Q8CEC0 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Nup88Q8CEC0 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nup88Q8CEC0 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Gm13875-201ENSMUST00000120162 282 ntBASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Gm18753-201ENSMUST00000201000 566 ntBASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Gm35960-201ENSMUST00000202712 767 ntBASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Gm44967-201ENSMUST00000207047 631 ntBASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Nup88Q8CEC0 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.33□□□□□ -0.11
Nup88Q8CEC0 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nup88Q8CEC0 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nup88Q8CEC0 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Nup88Q8CEC0 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nup88Q8CEC0 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Nup88Q8CEC0 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Nup88Q8CEC0 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup88Q8CEC0 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup88Q8CEC0 Ptprm-203ENSMUST00000224091 3773 ntBASIC14.33□□□□□ -0.12
Nup88Q8CEC0 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Nup88Q8CEC0 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup88Q8CEC0 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nup88Q8CEC0 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup88Q8CEC0 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nup88Q8CEC0 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.33□□□□□ -0.12
Nup88Q8CEC0 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nup88Q8CEC0 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nup88Q8CEC0 Gm24990-201ENSMUST00000157406 323 ntBASIC14.33□□□□□ -0.12
Nup88Q8CEC0 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup88Q8CEC0 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC14.33□□□□□ -0.12
Nup88Q8CEC0 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC14.33□□□□□ -0.12
Nup88Q8CEC0 Rps4l-202ENSMUST00000204242 789 ntBASIC14.33□□□□□ -0.12
Nup88Q8CEC0 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC14.33□□□□□ -0.12
Nup88Q8CEC0 Gm18212-201ENSMUST00000211678 889 ntBASIC14.33□□□□□ -0.12
Nup88Q8CEC0 AC155637.1-201ENSMUST00000218560 636 ntBASIC14.33□□□□□ -0.12
Nup88Q8CEC0 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC14.33□□□□□ -0.12
Nup88Q8CEC0 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup88Q8CEC0 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup88Q8CEC0 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup88Q8CEC0 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Nup88Q8CEC0 Gm22058-201ENSMUST00000083393 310 ntBASIC14.33□□□□□ -0.12
Nup88Q8CEC0 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Nup88Q8CEC0 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup88Q8CEC0 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nup88Q8CEC0 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms