Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 Gm43118-201ENSMUST00000199149 775 ntBASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 Gm39404-201ENSMUST00000216350 313 ntBASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 Gm4780-202ENSMUST00000215200 2644 ntBASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vcpip1Q8CDG3 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Gm22018-201ENSMUST00000104357 131 ntBASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Gm15808-201ENSMUST00000119046 604 ntBASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Gm26083-201ENSMUST00000157904 193 ntBASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Vcpip1Q8CDG3 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vcpip1Q8CDG3 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms