Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Lrif1Q8CDD9 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Lrif1Q8CDD9 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lrif1Q8CDD9 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lrif1Q8CDD9 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Lrif1Q8CDD9 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.02□□□□□ -0.49
Lrif1Q8CDD9 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lrif1Q8CDD9 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lrif1Q8CDD9 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lrif1Q8CDD9 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Lrif1Q8CDD9 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lrif1Q8CDD9 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lrif1Q8CDD9 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lrif1Q8CDD9 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lrif1Q8CDD9 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lrif1Q8CDD9 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lrif1Q8CDD9 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lrif1Q8CDD9 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.02□□□□□ -0.49
Lrif1Q8CDD9 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Lrif1Q8CDD9 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Gm44882-201ENSMUST00000205702 802 ntBASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lrif1Q8CDD9 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lrif1Q8CDD9 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lrif1Q8CDD9 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lrif1Q8CDD9 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lrif1Q8CDD9 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Lrif1Q8CDD9 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Lrif1Q8CDD9 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lrif1Q8CDD9 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Lrif1Q8CDD9 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lrif1Q8CDD9 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lrif1Q8CDD9 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lrif1Q8CDD9 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lrif1Q8CDD9 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lrif1Q8CDD9 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lrif1Q8CDD9 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12□□□□□ -0.49
Lrif1Q8CDD9 Gm5187-201ENSMUST00000117317 991 ntBASIC12□□□□□ -0.49
Lrif1Q8CDD9 Gm13369-201ENSMUST00000119442 987 ntBASIC12□□□□□ -0.49
Lrif1Q8CDD9 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12□□□□□ -0.49
Lrif1Q8CDD9 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lrif1Q8CDD9 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lrif1Q8CDD9 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Lrif1Q8CDD9 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12□□□□□ -0.49
Lrif1Q8CDD9 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12□□□□□ -0.49
Lrif1Q8CDD9 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12□□□□□ -0.49
Lrif1Q8CDD9 Gm6013-201ENSMUST00000212264 699 ntBASIC12□□□□□ -0.49
Lrif1Q8CDD9 AC134254.1-201ENSMUST00000221362 167 ntBASIC12□□□□□ -0.49
Lrif1Q8CDD9 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lrif1Q8CDD9 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lrif1Q8CDD9 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lrif1Q8CDD9 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lrif1Q8CDD9 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12□□□□□ -0.49
Lrif1Q8CDD9 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lrif1Q8CDD9 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12□□□□□ -0.49
Lrif1Q8CDD9 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12□□□□□ -0.49
Lrif1Q8CDD9 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lrif1Q8CDD9 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12□□□□□ -0.49
Lrif1Q8CDD9 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lrif1Q8CDD9 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lrif1Q8CDD9 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms