Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Gm9899-201ENSMUST00000065519 555 ntBASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Gm26956-201ENSMUST00000182176 986 ntBASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf3Q8C120 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms