Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.52□□□□□ -0.41
Trub1Q8C0D0 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.52□□□□□ -0.41
Trub1Q8C0D0 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trub1Q8C0D0 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trub1Q8C0D0 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.52□□□□□ -0.41
Trub1Q8C0D0 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.52□□□□□ -0.41
Trub1Q8C0D0 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trub1Q8C0D0 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trub1Q8C0D0 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trub1Q8C0D0 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trub1Q8C0D0 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trub1Q8C0D0 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trub1Q8C0D0 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trub1Q8C0D0 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.52□□□□□ -0.41
Trub1Q8C0D0 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trub1Q8C0D0 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trub1Q8C0D0 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trub1Q8C0D0 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.52□□□□□ -0.41
Trub1Q8C0D0 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trub1Q8C0D0 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Trub1Q8C0D0 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trub1Q8C0D0 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trub1Q8C0D0 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trub1Q8C0D0 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Gm8885-201ENSMUST00000189382 598 ntBASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Gm38266-201ENSMUST00000194931 421 ntBASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trub1Q8C0D0 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trub1Q8C0D0 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trub1Q8C0D0 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trub1Q8C0D0 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.5□□□□□ -0.41
Trub1Q8C0D0 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trub1Q8C0D0 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trub1Q8C0D0 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trub1Q8C0D0 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trub1Q8C0D0 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trub1Q8C0D0 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trub1Q8C0D0 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
Trub1Q8C0D0 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trub1Q8C0D0 Gm6963-201ENSMUST00000147879 379 ntBASIC12.5□□□□□ -0.41
Trub1Q8C0D0 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trub1Q8C0D0 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
Trub1Q8C0D0 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trub1Q8C0D0 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
Trub1Q8C0D0 Gm5070-201ENSMUST00000177599 862 ntBASIC12.5□□□□□ -0.41
Trub1Q8C0D0 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.5□□□□□ -0.41
Trub1Q8C0D0 Gm9230-201ENSMUST00000188228 532 ntBASIC12.5□□□□□ -0.41
Trub1Q8C0D0 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trub1Q8C0D0 Gm9136-201ENSMUST00000193368 454 ntBASIC12.5□□□□□ -0.41
Trub1Q8C0D0 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.5□□□□□ -0.41
Trub1Q8C0D0 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trub1Q8C0D0 Gm17931-201ENSMUST00000208132 634 ntBASIC12.5□□□□□ -0.41
Trub1Q8C0D0 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trub1Q8C0D0 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.5□□□□□ -0.41
Trub1Q8C0D0 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.5□□□□□ -0.41
Trub1Q8C0D0 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms