Protein–RNA interactions for Protein: Q8BXS2

Tnfsfm13, Tumor necrosis factor (ligand) superfamily, membrane-bound member 13, mousemouse

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsfm13Q8BXS2 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfsfm13Q8BXS2 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfsfm13Q8BXS2 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfsfm13Q8BXS2 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfsfm13Q8BXS2 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfsfm13Q8BXS2 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfsfm13Q8BXS2 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Snora78-201ENSMUST00000158630 128 ntBASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Gm24548-201ENSMUST00000158650 108 ntBASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Gm27514-201ENSMUST00000183692 110 ntBASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsfm13Q8BXS2 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 Gm6023-201ENSMUST00000118217 606 ntBASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 Gm9728-201ENSMUST00000200197 1055 ntBASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 Gm24136-201ENSMUST00000083374 165 ntBASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsfm13Q8BXS2 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms