Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Map1b-203ENSMUST00000223725 2669 ntBASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Gm9022-201ENSMUST00000182482 992 ntBASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Gm27390-201ENSMUST00000184516 176 ntBASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Gm21769-201ENSMUST00000211922 111 ntBASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Gm30285-201ENSMUST00000214614 422 ntBASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4Q8BQZ5 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms