Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Gm37849-201ENSMUST00000194722 1881 ntBASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Gm12036-201ENSMUST00000120008 530 ntBASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Gm3890-201ENSMUST00000182416 207 ntBASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Gm43818-201ENSMUST00000200605 466 ntBASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 n-R5s195-201ENSMUST00000082891 119 ntBASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Gm43760-201ENSMUST00000202120 3015 ntBASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Cdhr3Q8BL00 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 Gm7809-201ENSMUST00000153199 742 ntBASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 Gm4935-201ENSMUST00000221316 1198 ntBASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdhr3Q8BL00 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms