Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc40Q8BI79 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ccdc40Q8BI79 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc40Q8BI79 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc40Q8BI79 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.75□□□□□ -0.37
Ccdc40Q8BI79 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Ccdc40Q8BI79 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.75□□□□□ -0.37
Ccdc40Q8BI79 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.75□□□□□ -0.37
Ccdc40Q8BI79 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.75□□□□□ -0.37
Ccdc40Q8BI79 Gm44405-201ENSMUST00000198952 126 ntBASIC12.75□□□□□ -0.37
Ccdc40Q8BI79 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc40Q8BI79 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Ccdc40Q8BI79 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc40Q8BI79 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.75□□□□□ -0.37
Ccdc40Q8BI79 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc40Q8BI79 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.75□□□□□ -0.37
Ccdc40Q8BI79 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc40Q8BI79 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc40Q8BI79 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc40Q8BI79 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
Ccdc40Q8BI79 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc40Q8BI79 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc40Q8BI79 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Ccdc40Q8BI79 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Ccdc40Q8BI79 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc40Q8BI79 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc40Q8BI79 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc40Q8BI79 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc40Q8BI79 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc40Q8BI79 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.75□□□□□ -0.37
Ccdc40Q8BI79 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.75□□□□□ -0.37
Ccdc40Q8BI79 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ccdc40Q8BI79 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc40Q8BI79 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc40Q8BI79 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc40Q8BI79 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Ccdc40Q8BI79 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.75□□□□□ -0.37
Ccdc40Q8BI79 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 CT009713.5-203ENSMUST00000224218 2079 ntBASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 Gm6007-201ENSMUST00000208170 823 ntBASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc40Q8BI79 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Gm13736-201ENSMUST00000119272 253 ntBASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Gm13315-201ENSMUST00000120376 991 ntBASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Gm11597-201ENSMUST00000121423 964 ntBASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
Ccdc40Q8BI79 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms