Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn3Q8BHH8 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn3Q8BHH8 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn3Q8BHH8 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Gm13392-201ENSMUST00000117708 150 ntBASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Gm13316-201ENSMUST00000140537 691 ntBASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Gm29396-201ENSMUST00000185659 716 ntBASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Gm18304-201ENSMUST00000189162 546 ntBASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clrn3Q8BHH8 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 Gm9022-201ENSMUST00000182482 992 ntBASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 Gm37489-201ENSMUST00000191883 159 ntBASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 Gm38158-201ENSMUST00000194617 339 ntBASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 Gm44958-201ENSMUST00000203734 736 ntBASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clrn3Q8BHH8 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Clrn3Q8BHH8 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Clrn3Q8BHH8 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clrn3Q8BHH8 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clrn3Q8BHH8 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Clrn3Q8BHH8 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.46□□□□□ -0.58
Clrn3Q8BHH8 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Clrn3Q8BHH8 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Clrn3Q8BHH8 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clrn3Q8BHH8 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Clrn3Q8BHH8 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.46□□□□□ -0.58
Clrn3Q8BHH8 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clrn3Q8BHH8 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms