Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 Gzmn-202ENSMUST00000225535 989 ntBASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Gm6963-201ENSMUST00000147879 379 ntBASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4bQ8BGE6 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Gm14247-201ENSMUST00000120950 237 ntBASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Gm9230-201ENSMUST00000188228 532 ntBASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 126.3 ms