Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Usp6nlQ80XC3 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Usp6nlQ80XC3 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Usp6nlQ80XC3 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Usp6nlQ80XC3 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Usp6nlQ80XC3 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Usp6nlQ80XC3 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Usp6nlQ80XC3 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Usp6nlQ80XC3 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Usp6nlQ80XC3 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Usp6nlQ80XC3 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Usp6nlQ80XC3 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Usp6nlQ80XC3 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Usp6nlQ80XC3 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Usp6nlQ80XC3 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Gm5419-201ENSMUST00000119301 527 ntBASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Usp6nlQ80XC3 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Usp6nlQ80XC3 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Usp6nlQ80XC3 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Usp6nlQ80XC3 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Usp6nlQ80XC3 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Usp6nlQ80XC3 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Usp6nlQ80XC3 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.4□□□□□ -0.26
Usp6nlQ80XC3 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Usp6nlQ80XC3 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Usp6nlQ80XC3 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Usp6nlQ80XC3 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Usp6nlQ80XC3 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.4□□□□□ -0.26
Usp6nlQ80XC3 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Usp6nlQ80XC3 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.4□□□□□ -0.26
Usp6nlQ80XC3 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Usp6nlQ80XC3 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Usp6nlQ80XC3 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Usp6nlQ80XC3 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Usp6nlQ80XC3 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Usp6nlQ80XC3 AC173482.6-201ENSMUST00000225889 1741 ntBASIC13.4□□□□□ -0.26
Usp6nlQ80XC3 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Usp6nlQ80XC3 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC13.4□□□□□ -0.26
Usp6nlQ80XC3 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Usp6nlQ80XC3 Gm22138-201ENSMUST00000158748 128 ntBASIC13.4□□□□□ -0.26
Usp6nlQ80XC3 Gm9358-201ENSMUST00000183067 927 ntBASIC13.4□□□□□ -0.26
Usp6nlQ80XC3 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC13.4□□□□□ -0.26
Usp6nlQ80XC3 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC13.4□□□□□ -0.26
Usp6nlQ80XC3 Gm18893-201ENSMUST00000198416 943 ntBASIC13.4□□□□□ -0.26
Usp6nlQ80XC3 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Usp6nlQ80XC3 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Usp6nlQ80XC3 AC134860.1-201ENSMUST00000224867 660 ntBASIC13.4□□□□□ -0.26
Usp6nlQ80XC3 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Usp6nlQ80XC3 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Usp6nlQ80XC3 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Usp6nlQ80XC3 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Usp6nlQ80XC3 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
Usp6nlQ80XC3 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.4□□□□□ -0.27
Usp6nlQ80XC3 AC169511.2-201ENSMUST00000226674 2063 ntBASIC13.4□□□□□ -0.27
Usp6nlQ80XC3 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Usp6nlQ80XC3 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Usp6nlQ80XC3 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.39□□□□□ -0.27
Usp6nlQ80XC3 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 233.8 ms