Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc116Q80X53 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc116Q80X53 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc116Q80X53 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ccdc116Q80X53 Gm12957-201ENSMUST00000117835 377 ntBASIC11.92□□□□□ -0.5
Ccdc116Q80X53 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc116Q80X53 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.92□□□□□ -0.5
Ccdc116Q80X53 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.92□□□□□ -0.5
Ccdc116Q80X53 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc116Q80X53 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.92□□□□□ -0.5
Ccdc116Q80X53 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc116Q80X53 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.92□□□□□ -0.5
Ccdc116Q80X53 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.92□□□□□ -0.5
Ccdc116Q80X53 Morn2-202ENSMUST00000227729 656 ntBASIC11.92□□□□□ -0.5
Ccdc116Q80X53 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc116Q80X53 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc116Q80X53 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc116Q80X53 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ccdc116Q80X53 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.92□□□□□ -0.5
Ccdc116Q80X53 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC11.92□□□□□ -0.5
Ccdc116Q80X53 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc116Q80X53 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc116Q80X53 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc116Q80X53 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc116Q80X53 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.92□□□□□ -0.5
Ccdc116Q80X53 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc116Q80X53 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc116Q80X53 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.92□□□□□ -0.5
Ccdc116Q80X53 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc116Q80X53 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc116Q80X53 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc116Q80X53 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc116Q80X53 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc116Q80X53 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc116Q80X53 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc116Q80X53 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Ccdc116Q80X53 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc116Q80X53 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc116Q80X53 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.91□□□□□ -0.5
Ccdc116Q80X53 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.91□□□□□ -0.5
Ccdc116Q80X53 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.91□□□□□ -0.5
Ccdc116Q80X53 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.91□□□□□ -0.5
Ccdc116Q80X53 AY702102-202ENSMUST00000194651 1173 ntBASIC11.91□□□□□ -0.5
Ccdc116Q80X53 Gm18062-201ENSMUST00000208020 547 ntBASIC11.91□□□□□ -0.5
Ccdc116Q80X53 Gm18055-201ENSMUST00000208254 547 ntBASIC11.91□□□□□ -0.5
Ccdc116Q80X53 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc116Q80X53 Gm19994-201ENSMUST00000217086 586 ntBASIC11.91□□□□□ -0.5
Ccdc116Q80X53 CT009754.4-201ENSMUST00000221430 565 ntBASIC11.91□□□□□ -0.5
Ccdc116Q80X53 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc116Q80X53 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.91□□□□□ -0.5
Ccdc116Q80X53 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc116Q80X53 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc116Q80X53 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.91□□□□□ -0.5
Ccdc116Q80X53 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc116Q80X53 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc116Q80X53 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.91□□□□□ -0.5
Ccdc116Q80X53 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc116Q80X53 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc116Q80X53 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ccdc116Q80X53 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc116Q80X53 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc116Q80X53 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.91□□□□□ -0.5
Ccdc116Q80X53 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc116Q80X53 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc116Q80X53 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ccdc116Q80X53 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc116Q80X53 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc116Q80X53 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc116Q80X53 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc116Q80X53 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.9□□□□□ -0.5
Ccdc116Q80X53 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc116Q80X53 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc116Q80X53 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc116Q80X53 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc116Q80X53 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.9□□□□□ -0.5
Ccdc116Q80X53 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ccdc116Q80X53 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc116Q80X53 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc116Q80X53 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ccdc116Q80X53 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc116Q80X53 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc116Q80X53 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc116Q80X53 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc116Q80X53 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc116Q80X53 Gm13183-201ENSMUST00000118615 789 ntBASIC11.9□□□□□ -0.5
Ccdc116Q80X53 Gm14247-201ENSMUST00000120950 237 ntBASIC11.9□□□□□ -0.5
Ccdc116Q80X53 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.9□□□□□ -0.5
Ccdc116Q80X53 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Ccdc116Q80X53 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.9□□□□□ -0.5
Ccdc116Q80X53 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.9□□□□□ -0.5
Ccdc116Q80X53 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc116Q80X53 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Ccdc116Q80X53 Gm27572-201ENSMUST00000183702 255 ntBASIC11.9□□□□□ -0.5
Ccdc116Q80X53 Gm29396-201ENSMUST00000185659 716 ntBASIC11.9□□□□□ -0.5
Ccdc116Q80X53 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc116Q80X53 Gm9136-201ENSMUST00000193368 454 ntBASIC11.9□□□□□ -0.5
Ccdc116Q80X53 Olfr284-202ENSMUST00000206647 966 ntBASIC11.9□□□□□ -0.5
Ccdc116Q80X53 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc116Q80X53 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.9□□□□□ -0.5
Ccdc116Q80X53 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms