Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scaf4Q6PFF0 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Scaf4Q6PFF0 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Scaf4Q6PFF0 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scaf4Q6PFF0 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Scaf4Q6PFF0 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scaf4Q6PFF0 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
Scaf4Q6PFF0 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scaf4Q6PFF0 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scaf4Q6PFF0 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scaf4Q6PFF0 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scaf4Q6PFF0 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.96□□□□□ -0.49
Scaf4Q6PFF0 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scaf4Q6PFF0 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Scaf4Q6PFF0 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.96□□□□□ -0.49
Scaf4Q6PFF0 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Scaf4Q6PFF0 Gm13323-201ENSMUST00000120245 1151 ntBASIC11.96□□□□□ -0.49
Scaf4Q6PFF0 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.96□□□□□ -0.49
Scaf4Q6PFF0 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Scaf4Q6PFF0 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.96□□□□□ -0.49
Scaf4Q6PFF0 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.96□□□□□ -0.49
Scaf4Q6PFF0 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scaf4Q6PFF0 Gm27892-201ENSMUST00000185017 106 ntBASIC11.96□□□□□ -0.49
Scaf4Q6PFF0 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.96□□□□□ -0.49
Scaf4Q6PFF0 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.96□□□□□ -0.49
Scaf4Q6PFF0 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.96□□□□□ -0.49
Scaf4Q6PFF0 Gm10076-201ENSMUST00000073238 384 ntBASIC11.96□□□□□ -0.49
Scaf4Q6PFF0 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scaf4Q6PFF0 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Scaf4Q6PFF0 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scaf4Q6PFF0 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.96□□□□□ -0.49
Scaf4Q6PFF0 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Scaf4Q6PFF0 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Scaf4Q6PFF0 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Scaf4Q6PFF0 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Scaf4Q6PFF0 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Scaf4Q6PFF0 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Scaf4Q6PFF0 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.96□□□□□ -0.5
Scaf4Q6PFF0 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Scaf4Q6PFF0 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Scaf4Q6PFF0 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Scaf4Q6PFF0 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Scaf4Q6PFF0 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Gm13342-201ENSMUST00000121055 207 ntBASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Gm5781-201ENSMUST00000219792 443 ntBASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.95□□□□□ -0.5
Scaf4Q6PFF0 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scaf4Q6PFF0 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms