Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.23□□□□□ -0.45
Rad54bQ6PFE3 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rad54bQ6PFE3 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.23□□□□□ -0.45
Rad54bQ6PFE3 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.23□□□□□ -0.45
Rad54bQ6PFE3 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rad54bQ6PFE3 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rad54bQ6PFE3 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rad54bQ6PFE3 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rad54bQ6PFE3 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rad54bQ6PFE3 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rad54bQ6PFE3 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rad54bQ6PFE3 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rad54bQ6PFE3 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.23□□□□□ -0.45
Rad54bQ6PFE3 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rad54bQ6PFE3 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rad54bQ6PFE3 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rad54bQ6PFE3 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rad54bQ6PFE3 Gm13316-201ENSMUST00000140537 691 ntBASIC12.23□□□□□ -0.45
Rad54bQ6PFE3 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.23□□□□□ -0.45
Rad54bQ6PFE3 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rad54bQ6PFE3 Gm28882-201ENSMUST00000185504 314 ntBASIC12.23□□□□□ -0.45
Rad54bQ6PFE3 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rad54bQ6PFE3 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.23□□□□□ -0.45
Rad54bQ6PFE3 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rad54bQ6PFE3 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rad54bQ6PFE3 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rad54bQ6PFE3 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rad54bQ6PFE3 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rad54bQ6PFE3 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rad54bQ6PFE3 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rad54bQ6PFE3 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.23□□□□□ -0.45
Rad54bQ6PFE3 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rad54bQ6PFE3 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Rad54bQ6PFE3 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Rad54bQ6PFE3 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rad54bQ6PFE3 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Mir1247-201ENSMUST00000116706 82 ntBASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Rprl1-201ENSMUST00000158050 327 ntBASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rad54bQ6PFE3 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Rad54bQ6PFE3 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rad54bQ6PFE3 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rad54bQ6PFE3 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rad54bQ6PFE3 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rad54bQ6PFE3 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rad54bQ6PFE3 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.21□□□□□ -0.45
Rad54bQ6PFE3 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rad54bQ6PFE3 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rad54bQ6PFE3 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rad54bQ6PFE3 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Rad54bQ6PFE3 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rad54bQ6PFE3 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms