Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nup98Q6PFD9 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Nup98Q6PFD9 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.08□□□□□ -0.16
Nup98Q6PFD9 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nup98Q6PFD9 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup98Q6PFD9 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup98Q6PFD9 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup98Q6PFD9 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.08□□□□□ -0.16
Nup98Q6PFD9 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup98Q6PFD9 Gm14071-201ENSMUST00000117817 509 ntBASIC14.08□□□□□ -0.16
Nup98Q6PFD9 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nup98Q6PFD9 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup98Q6PFD9 Gm27910-201ENSMUST00000185004 107 ntBASIC14.08□□□□□ -0.16
Nup98Q6PFD9 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC14.08□□□□□ -0.16
Nup98Q6PFD9 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC14.08□□□□□ -0.16
Nup98Q6PFD9 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Nup98Q6PFD9 AC153929.1-201ENSMUST00000219009 303 ntBASIC14.08□□□□□ -0.16
Nup98Q6PFD9 Gm3619-201ENSMUST00000219947 775 ntBASIC14.08□□□□□ -0.16
Nup98Q6PFD9 Gm23105-201ENSMUST00000083719 134 ntBASIC14.08□□□□□ -0.16
Nup98Q6PFD9 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup98Q6PFD9 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup98Q6PFD9 Gm8146-201ENSMUST00000192106 1847 ntBASIC14.08□□□□□ -0.16
Nup98Q6PFD9 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nup98Q6PFD9 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Nup98Q6PFD9 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup98Q6PFD9 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup98Q6PFD9 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup98Q6PFD9 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Nup98Q6PFD9 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup98Q6PFD9 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Nup98Q6PFD9 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nup98Q6PFD9 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
Nup98Q6PFD9 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup98Q6PFD9 Gm43242-201ENSMUST00000199507 1776 ntBASIC14.07□□□□□ -0.16
Nup98Q6PFD9 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Nup98Q6PFD9 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup98Q6PFD9 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nup98Q6PFD9 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC14.07□□□□□ -0.16
Nup98Q6PFD9 Gm11422-201ENSMUST00000118925 1103 ntBASIC14.07□□□□□ -0.16
Nup98Q6PFD9 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nup98Q6PFD9 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nup98Q6PFD9 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup98Q6PFD9 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nup98Q6PFD9 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nup98Q6PFD9 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nup98Q6PFD9 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Nup98Q6PFD9 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Nup98Q6PFD9 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC14.07□□□□□ -0.16
Nup98Q6PFD9 Gm5996-201ENSMUST00000211110 718 ntBASIC14.07□□□□□ -0.16
Nup98Q6PFD9 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC14.07□□□□□ -0.16
Nup98Q6PFD9 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC14.07□□□□□ -0.16
Nup98Q6PFD9 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup98Q6PFD9 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup98Q6PFD9 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup98Q6PFD9 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nup98Q6PFD9 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Nup98Q6PFD9 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup98Q6PFD9 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup98Q6PFD9 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Nup98Q6PFD9 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup98Q6PFD9 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup98Q6PFD9 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Nup98Q6PFD9 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup98Q6PFD9 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup98Q6PFD9 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nup98Q6PFD9 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Nup98Q6PFD9 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Gm5100-201ENSMUST00000195631 589 ntBASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 AC154257.1-202ENSMUST00000224729 843 ntBASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Gm44190-201ENSMUST00000205083 1401 ntBASIC14.06□□□□□ -0.16
Nup98Q6PFD9 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms