Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm12742-201ENSMUST00000117326 410 ntBASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Gm14127-201ENSMUST00000117906 678 ntBASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Rprl1-201ENSMUST00000158050 327 ntBASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Gm17420-201ENSMUST00000164753 153 ntBASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Sp140Q6NSQ5 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sp140Q6NSQ5 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sp140Q6NSQ5 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sp140Q6NSQ5 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sp140Q6NSQ5 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sp140Q6NSQ5 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sp140Q6NSQ5 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sp140Q6NSQ5 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sp140Q6NSQ5 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sp140Q6NSQ5 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sp140Q6NSQ5 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.31□□□□□ -0.44
Sp140Q6NSQ5 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.31□□□□□ -0.44
Sp140Q6NSQ5 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.31□□□□□ -0.44
Sp140Q6NSQ5 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.31□□□□□ -0.44
Sp140Q6NSQ5 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.31□□□□□ -0.44
Sp140Q6NSQ5 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.31□□□□□ -0.44
Sp140Q6NSQ5 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.31□□□□□ -0.44
Sp140Q6NSQ5 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sp140Q6NSQ5 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sp140Q6NSQ5 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sp140Q6NSQ5 Gm9996-201ENSMUST00000070359 913 ntBASIC12.31□□□□□ -0.44
Sp140Q6NSQ5 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sp140Q6NSQ5 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sp140Q6NSQ5 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Sp140Q6NSQ5 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.31□□□□□ -0.44
Sp140Q6NSQ5 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sp140Q6NSQ5 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sp140Q6NSQ5 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.31□□□□□ -0.44
Sp140Q6NSQ5 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sp140Q6NSQ5 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sp140Q6NSQ5 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sp140Q6NSQ5 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sp140Q6NSQ5 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sp140Q6NSQ5 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.31□□□□□ -0.44
Sp140Q6NSQ5 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.31□□□□□ -0.44
Sp140Q6NSQ5 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sp140Q6NSQ5 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Gm23912-201ENSMUST00000104687 87 ntBASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Gm27501-201ENSMUST00000183599 107 ntBASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Gm19994-201ENSMUST00000217086 586 ntBASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Gm10478-201ENSMUST00000084451 396 ntBASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms