Protein–RNA interactions for Protein: Q62209

Sycp1, Synaptonemal complex protein 1, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sycp1Q62209 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.67□□□□□ -0.22
Sycp1Q62209 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sycp1Q62209 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sycp1Q62209 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Sycp1Q62209 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sycp1Q62209 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sycp1Q62209 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sycp1Q62209 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.66□□□□□ -0.22
Sycp1Q62209 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sycp1Q62209 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sycp1Q62209 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.66□□□□□ -0.22
Sycp1Q62209 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Sycp1Q62209 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sycp1Q62209 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Sycp1Q62209 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sycp1Q62209 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sycp1Q62209 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sycp1Q62209 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sycp1Q62209 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sycp1Q62209 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.66□□□□□ -0.22
Sycp1Q62209 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Sycp1Q62209 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Sycp1Q62209 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Sycp1Q62209 Gm14723-201ENSMUST00000118686 215 ntBASIC13.66□□□□□ -0.22
Sycp1Q62209 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Sycp1Q62209 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.66□□□□□ -0.22
Sycp1Q62209 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.66□□□□□ -0.22
Sycp1Q62209 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.66□□□□□ -0.22
Sycp1Q62209 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.66□□□□□ -0.22
Sycp1Q62209 Gm43822-201ENSMUST00000200285 476 ntBASIC13.66□□□□□ -0.22
Sycp1Q62209 Gm45865-201ENSMUST00000211815 945 ntBASIC13.66□□□□□ -0.22
Sycp1Q62209 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.66□□□□□ -0.22
Sycp1Q62209 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sycp1Q62209 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Sycp1Q62209 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sycp1Q62209 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sycp1Q62209 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sycp1Q62209 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sycp1Q62209 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.66□□□□□ -0.22
Sycp1Q62209 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sycp1Q62209 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sycp1Q62209 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Sycp1Q62209 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Sycp1Q62209 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sycp1Q62209 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.66□□□□□ -0.22
Sycp1Q62209 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sycp1Q62209 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sycp1Q62209 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sycp1Q62209 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sycp1Q62209 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sycp1Q62209 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC13.66□□□□□ -0.22
Sycp1Q62209 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sycp1Q62209 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.66□□□□□ -0.22
Sycp1Q62209 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sycp1Q62209 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sycp1Q62209 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sycp1Q62209 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sycp1Q62209 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Sycp1Q62209 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sycp1Q62209 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sycp1Q62209 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sycp1Q62209 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sycp1Q62209 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sycp1Q62209 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sycp1Q62209 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sycp1Q62209 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Sycp1Q62209 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sycp1Q62209 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sycp1Q62209 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sycp1Q62209 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Sycp1Q62209 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Sycp1Q62209 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sycp1Q62209 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.65□□□□□ -0.22
Sycp1Q62209 Gm13570-201ENSMUST00000140763 309 ntBASIC13.65□□□□□ -0.22
Sycp1Q62209 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Sycp1Q62209 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.65□□□□□ -0.22
Sycp1Q62209 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.65□□□□□ -0.22
Sycp1Q62209 Gm18304-201ENSMUST00000189162 546 ntBASIC13.65□□□□□ -0.22
Sycp1Q62209 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.65□□□□□ -0.22
Sycp1Q62209 Gm30285-201ENSMUST00000214614 422 ntBASIC13.65□□□□□ -0.22
Sycp1Q62209 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sycp1Q62209 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sycp1Q62209 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sycp1Q62209 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Sycp1Q62209 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sycp1Q62209 Gm38187-201ENSMUST00000195609 4709 ntBASIC13.65□□□□□ -0.22
Sycp1Q62209 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sycp1Q62209 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sycp1Q62209 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sycp1Q62209 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Sycp1Q62209 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
Sycp1Q62209 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sycp1Q62209 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sycp1Q62209 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Sycp1Q62209 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.64□□□□□ -0.23
Sycp1Q62209 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.64□□□□□ -0.23
Sycp1Q62209 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sycp1Q62209 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sycp1Q62209 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Sycp1Q62209 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms