Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx2Q61412 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx2Q61412 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx2Q61412 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx2Q61412 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.86□□□□□ -0.51
Vsx2Q61412 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.86□□□□□ -0.51
Vsx2Q61412 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx2Q61412 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx2Q61412 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx2Q61412 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx2Q61412 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx2Q61412 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.86□□□□□ -0.51
Vsx2Q61412 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx2Q61412 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.86□□□□□ -0.51
Vsx2Q61412 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx2Q61412 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx2Q61412 Gm27243-201ENSMUST00000183964 521 ntBASIC11.86□□□□□ -0.51
Vsx2Q61412 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.86□□□□□ -0.51
Vsx2Q61412 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.86□□□□□ -0.51
Vsx2Q61412 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx2Q61412 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx2Q61412 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx2Q61412 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Vsx2Q61412 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx2Q61412 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx2Q61412 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.86□□□□□ -0.51
Vsx2Q61412 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx2Q61412 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.86□□□□□ -0.51
Vsx2Q61412 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx2Q61412 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx2Q61412 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx2Q61412 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx2Q61412 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.86□□□□□ -0.51
Vsx2Q61412 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.86□□□□□ -0.51
Vsx2Q61412 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx2Q61412 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx2Q61412 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Vsx2Q61412 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx2Q61412 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.86□□□□□ -0.51
Vsx2Q61412 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx2Q61412 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.86□□□□□ -0.51
Vsx2Q61412 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx2Q61412 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx2Q61412 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.85□□□□□ -0.51
Vsx2Q61412 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx2Q61412 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx2Q61412 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx2Q61412 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx2Q61412 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx2Q61412 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx2Q61412 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx2Q61412 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx2Q61412 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx2Q61412 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Vsx2Q61412 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx2Q61412 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx2Q61412 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.85□□□□□ -0.51
Vsx2Q61412 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.85□□□□□ -0.51
Vsx2Q61412 Gm22323-201ENSMUST00000103832 109 ntBASIC11.85□□□□□ -0.51
Vsx2Q61412 Gm24231-201ENSMUST00000104315 133 ntBASIC11.85□□□□□ -0.51
Vsx2Q61412 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.85□□□□□ -0.51
Vsx2Q61412 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx2Q61412 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx2Q61412 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Vsx2Q61412 Gm13570-201ENSMUST00000140763 309 ntBASIC11.85□□□□□ -0.51
Vsx2Q61412 Gm17376-201ENSMUST00000166016 84 ntBASIC11.85□□□□□ -0.51
Vsx2Q61412 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx2Q61412 Gm9022-201ENSMUST00000182482 992 ntBASIC11.85□□□□□ -0.51
Vsx2Q61412 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.85□□□□□ -0.51
Vsx2Q61412 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx2Q61412 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.85□□□□□ -0.51
Vsx2Q61412 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.85□□□□□ -0.51
Vsx2Q61412 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.85□□□□□ -0.51
Vsx2Q61412 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Vsx2Q61412 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx2Q61412 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.85□□□□□ -0.51
Vsx2Q61412 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx2Q61412 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx2Q61412 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx2Q61412 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx2Q61412 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.85□□□□□ -0.51
Vsx2Q61412 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx2Q61412 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx2Q61412 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx2Q61412 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx2Q61412 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx2Q61412 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx2Q61412 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vsx2Q61412 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Vsx2Q61412 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vsx2Q61412 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vsx2Q61412 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vsx2Q61412 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vsx2Q61412 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Vsx2Q61412 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.84□□□□□ -0.51
Vsx2Q61412 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Vsx2Q61412 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vsx2Q61412 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vsx2Q61412 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.84□□□□□ -0.51
Vsx2Q61412 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms