Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.67□□□□□ -0.54
Col12a1Q60847 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Col12a1Q60847 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col12a1Q60847 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Col12a1Q60847 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC11.67□□□□□ -0.54
Col12a1Q60847 AA623943-201ENSMUST00000121794 354 ntBASIC11.67□□□□□ -0.54
Col12a1Q60847 AC134248.1-201ENSMUST00000216113 1176 ntBASIC11.67□□□□□ -0.54
Col12a1Q60847 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC11.67□□□□□ -0.54
Col12a1Q60847 Gm26782-203ENSMUST00000227103 751 ntBASIC11.67□□□□□ -0.54
Col12a1Q60847 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col12a1Q60847 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col12a1Q60847 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Col12a1Q60847 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Col12a1Q60847 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col12a1Q60847 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col12a1Q60847 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col12a1Q60847 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.67□□□□□ -0.54
Col12a1Q60847 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col12a1Q60847 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col12a1Q60847 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col12a1Q60847 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC11.66□□□□□ -0.54
Col12a1Q60847 CT025689.1-201ENSMUST00000225214 283 ntBASIC11.66□□□□□ -0.54
Col12a1Q60847 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col12a1Q60847 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col12a1Q60847 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col12a1Q60847 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col12a1Q60847 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC11.66□□□□□ -0.54
Col12a1Q60847 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col12a1Q60847 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col12a1Q60847 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col12a1Q60847 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col12a1Q60847 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col12a1Q60847 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Col12a1Q60847 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col12a1Q60847 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col12a1Q60847 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col12a1Q60847 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Col12a1Q60847 Gm15374-201ENSMUST00000119313 844 ntBASIC11.66□□□□□ -0.54
Col12a1Q60847 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col12a1Q60847 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Col12a1Q60847 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.66□□□□□ -0.54
Col12a1Q60847 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.66□□□□□ -0.54
Col12a1Q60847 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.66□□□□□ -0.54
Col12a1Q60847 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col12a1Q60847 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.66□□□□□ -0.54
Col12a1Q60847 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC11.66□□□□□ -0.54
Col12a1Q60847 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col12a1Q60847 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col12a1Q60847 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col12a1Q60847 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col12a1Q60847 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC11.66□□□□□ -0.54
Col12a1Q60847 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Col12a1Q60847 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.66□□□□□ -0.54
Col12a1Q60847 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.66□□□□□ -0.54
Col12a1Q60847 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.66□□□□□ -0.54
Col12a1Q60847 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col12a1Q60847 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col12a1Q60847 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col12a1Q60847 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col12a1Q60847 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col12a1Q60847 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col12a1Q60847 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.66□□□□□ -0.54
Col12a1Q60847 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col12a1Q60847 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col12a1Q60847 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col12a1Q60847 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.66□□□□□ -0.54
Col12a1Q60847 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.66□□□□□ -0.54
Col12a1Q60847 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col12a1Q60847 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col12a1Q60847 Gm12389-201ENSMUST00000117696 418 ntBASIC11.66□□□□□ -0.54
Col12a1Q60847 Gm11475-201ENSMUST00000118482 476 ntBASIC11.66□□□□□ -0.54
Col12a1Q60847 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.66□□□□□ -0.54
Col12a1Q60847 Gm29543-201ENSMUST00000188138 967 ntBASIC11.66□□□□□ -0.54
Col12a1Q60847 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC11.66□□□□□ -0.54
Col12a1Q60847 Gm2474-201ENSMUST00000195162 559 ntBASIC11.66□□□□□ -0.54
Col12a1Q60847 AC152169.1-201ENSMUST00000223901 701 ntBASIC11.66□□□□□ -0.54
Col12a1Q60847 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col12a1Q60847 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col12a1Q60847 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col12a1Q60847 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col12a1Q60847 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.65□□□□□ -0.54
Col12a1Q60847 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col12a1Q60847 Gm10807-201ENSMUST00000177134 795 ntBASIC11.65□□□□□ -0.54
Col12a1Q60847 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col12a1Q60847 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC11.65□□□□□ -0.54
Col12a1Q60847 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col12a1Q60847 Gm38233-201ENSMUST00000194259 807 ntBASIC11.65□□□□□ -0.54
Col12a1Q60847 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC11.65□□□□□ -0.54
Col12a1Q60847 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col12a1Q60847 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col12a1Q60847 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.65□□□□□ -0.54
Col12a1Q60847 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col12a1Q60847 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col12a1Q60847 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.65□□□□□ -0.54
Col12a1Q60847 n-R5s71-201ENSMUST00000093668 119 ntBASIC11.65□□□□□ -0.54
Col12a1Q60847 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col12a1Q60847 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC11.65□□□□□ -0.54
Col12a1Q60847 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Col12a1Q60847 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Col12a1Q60847 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms