Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5d-4Q5R1F6 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Gm9200-201ENSMUST00000118513 1354 ntBASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Gm37489-201ENSMUST00000191883 159 ntBASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 AC153962.4-201ENSMUST00000217878 242 ntBASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5d-4Q5R1F6 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Gm15370-201ENSMUST00000117158 253 ntBASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Gm11531-201ENSMUST00000117614 555 ntBASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Gm13786-201ENSMUST00000122371 333 ntBASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Gm29396-201ENSMUST00000185659 716 ntBASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Gm5950-201ENSMUST00000213337 772 ntBASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Morn2-202ENSMUST00000227729 656 ntBASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms