Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm13492-201ENSMUST00000119772 665 ntBASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm11964-201ENSMUST00000120982 444 ntBASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm23119-201ENSMUST00000158610 140 ntBASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Proscos-202ENSMUST00000178990 666 ntBASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm37497-201ENSMUST00000195830 798 ntBASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm8463-201ENSMUST00000208573 613 ntBASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm18624-201ENSMUST00000220966 658 ntBASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm2824-203ENSMUST00000226189 1228 ntBASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 AC107453.4-201ENSMUST00000227068 1817 ntBASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm9124-201ENSMUST00000191789 1092 ntBASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm9113-201ENSMUST00000192510 1018 ntBASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm9131-201ENSMUST00000193557 1089 ntBASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm9121-201ENSMUST00000193749 1071 ntBASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm8598-201ENSMUST00000221184 836 ntBASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms