Protein–RNA interactions for Protein: Q52KF3

Spire1, Protein spire homolog 1, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spire1Q52KF3 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Spire1Q52KF3 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Spire1Q52KF3 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Spire1Q52KF3 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Spire1Q52KF3 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Spire1Q52KF3 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Spire1Q52KF3 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Spire1Q52KF3 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Spire1Q52KF3 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Spire1Q52KF3 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.39□□□□□ -0.43
Spire1Q52KF3 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC12.39□□□□□ -0.43
Spire1Q52KF3 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Spire1Q52KF3 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Spire1Q52KF3 Gm22144-201ENSMUST00000157402 102 ntBASIC12.39□□□□□ -0.43
Spire1Q52KF3 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.39□□□□□ -0.43
Spire1Q52KF3 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.39□□□□□ -0.43
Spire1Q52KF3 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.39□□□□□ -0.43
Spire1Q52KF3 Gm9132-201ENSMUST00000210182 832 ntBASIC12.39□□□□□ -0.43
Spire1Q52KF3 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Spire1Q52KF3 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Spire1Q52KF3 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Spire1Q52KF3 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Spire1Q52KF3 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Spire1Q52KF3 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.39□□□□□ -0.43
Spire1Q52KF3 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Spire1Q52KF3 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Spire1Q52KF3 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Spire1Q52KF3 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Spire1Q52KF3 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Spire1Q52KF3 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Spire1Q52KF3 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Spire1Q52KF3 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Spire1Q52KF3 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.39□□□□□ -0.43
Spire1Q52KF3 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.39□□□□□ -0.43
Spire1Q52KF3 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Spire1Q52KF3 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.38□□□□□ -0.43
Spire1Q52KF3 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Spire1Q52KF3 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Spire1Q52KF3 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Spire1Q52KF3 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Spire1Q52KF3 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Spire1Q52KF3 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Spire1Q52KF3 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Spire1Q52KF3 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Spire1Q52KF3 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.38□□□□□ -0.43
Spire1Q52KF3 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Spire1Q52KF3 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Spire1Q52KF3 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Spire1Q52KF3 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.38□□□□□ -0.43
Spire1Q52KF3 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Spire1Q52KF3 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Spire1Q52KF3 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.38□□□□□ -0.43
Spire1Q52KF3 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.38□□□□□ -0.43
Spire1Q52KF3 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.38□□□□□ -0.43
Spire1Q52KF3 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.38□□□□□ -0.43
Spire1Q52KF3 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Spire1Q52KF3 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Spire1Q52KF3 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Spire1Q52KF3 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Spire1Q52KF3 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.38□□□□□ -0.43
Spire1Q52KF3 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Spire1Q52KF3 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Spire1Q52KF3 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.38□□□□□ -0.43
Spire1Q52KF3 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Spire1Q52KF3 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Spire1Q52KF3 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Spire1Q52KF3 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Spire1Q52KF3 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Spire1Q52KF3 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.38□□□□□ -0.43
Spire1Q52KF3 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.37□□□□□ -0.43
Spire1Q52KF3 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Spire1Q52KF3 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Spire1Q52KF3 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Spire1Q52KF3 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.37□□□□□ -0.43
Spire1Q52KF3 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Spire1Q52KF3 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.37□□□□□ -0.43
Spire1Q52KF3 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Spire1Q52KF3 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Spire1Q52KF3 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Spire1Q52KF3 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Spire1Q52KF3 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Spire1Q52KF3 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Spire1Q52KF3 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Spire1Q52KF3 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Spire1Q52KF3 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.37□□□□□ -0.43
Spire1Q52KF3 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Spire1Q52KF3 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Spire1Q52KF3 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Spire1Q52KF3 Gm15207-201ENSMUST00000119259 442 ntBASIC12.37□□□□□ -0.43
Spire1Q52KF3 Gm15573-201ENSMUST00000119487 540 ntBASIC12.37□□□□□ -0.43
Spire1Q52KF3 Gm15595-201ENSMUST00000120840 961 ntBASIC12.37□□□□□ -0.43
Spire1Q52KF3 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Spire1Q52KF3 Gm5706-201ENSMUST00000181525 993 ntBASIC12.37□□□□□ -0.43
Spire1Q52KF3 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.37□□□□□ -0.43
Spire1Q52KF3 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC12.37□□□□□ -0.43
Spire1Q52KF3 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.37□□□□□ -0.43
Spire1Q52KF3 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.37□□□□□ -0.43
Spire1Q52KF3 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.37□□□□□ -0.43
Spire1Q52KF3 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.37□□□□□ -0.43
Spire1Q52KF3 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms