Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28047Q3US59 Gm13297-201ENSMUST00000120205 934 ntBASIC13.81□□□□□ -0.2
Gm28047Q3US59 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28047Q3US59 Gm8062-201ENSMUST00000139696 444 ntBASIC13.81□□□□□ -0.2
Gm28047Q3US59 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28047Q3US59 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.81□□□□□ -0.2
Gm28047Q3US59 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28047Q3US59 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Gm28047Q3US59 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28047Q3US59 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28047Q3US59 Gm29396-201ENSMUST00000185659 716 ntBASIC13.81□□□□□ -0.2
Gm28047Q3US59 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.81□□□□□ -0.2
Gm28047Q3US59 AY702102-202ENSMUST00000194651 1173 ntBASIC13.81□□□□□ -0.2
Gm28047Q3US59 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28047Q3US59 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28047Q3US59 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28047Q3US59 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28047Q3US59 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28047Q3US59 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Gm28047Q3US59 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28047Q3US59 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.81□□□□□ -0.2
Gm28047Q3US59 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28047Q3US59 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28047Q3US59 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28047Q3US59 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28047Q3US59 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28047Q3US59 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Gm28047Q3US59 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28047Q3US59 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28047Q3US59 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28047Q3US59 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28047Q3US59 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28047Q3US59 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28047Q3US59 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28047Q3US59 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28047Q3US59 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28047Q3US59 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28047Q3US59 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28047Q3US59 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.8□□□□□ -0.2
Gm28047Q3US59 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28047Q3US59 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.8□□□□□ -0.2
Gm28047Q3US59 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28047Q3US59 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28047Q3US59 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28047Q3US59 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28047Q3US59 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28047Q3US59 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28047Q3US59 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28047Q3US59 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC13.8□□□□□ -0.2
Gm28047Q3US59 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Gm28047Q3US59 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Gm28047Q3US59 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.8□□□□□ -0.2
Gm28047Q3US59 Gm37489-201ENSMUST00000191883 159 ntBASIC13.8□□□□□ -0.2
Gm28047Q3US59 Gm9136-201ENSMUST00000193368 454 ntBASIC13.8□□□□□ -0.2
Gm28047Q3US59 Olfr284-202ENSMUST00000206647 966 ntBASIC13.8□□□□□ -0.2
Gm28047Q3US59 Gm10608-202ENSMUST00000213924 676 ntBASIC13.8□□□□□ -0.2
Gm28047Q3US59 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28047Q3US59 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.8□□□□□ -0.2
Gm28047Q3US59 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28047Q3US59 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28047Q3US59 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28047Q3US59 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28047Q3US59 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28047Q3US59 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.8□□□□□ -0.2
Gm28047Q3US59 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.8□□□□□ -0.2
Gm28047Q3US59 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28047Q3US59 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.8□□□□□ -0.2
Gm28047Q3US59 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28047Q3US59 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28047Q3US59 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.8□□□□□ -0.2
Gm28047Q3US59 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28047Q3US59 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28047Q3US59 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28047Q3US59 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Gm28047Q3US59 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm28047Q3US59 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm28047Q3US59 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm28047Q3US59 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm28047Q3US59 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm28047Q3US59 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gm28047Q3US59 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm28047Q3US59 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC13.79□□□□□ -0.2
Gm28047Q3US59 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm28047Q3US59 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm28047Q3US59 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm28047Q3US59 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.79□□□□□ -0.2
Gm28047Q3US59 Gm12957-201ENSMUST00000117835 377 ntBASIC13.79□□□□□ -0.2
Gm28047Q3US59 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.79□□□□□ -0.2
Gm28047Q3US59 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gm28047Q3US59 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gm28047Q3US59 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.79□□□□□ -0.2
Gm28047Q3US59 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gm28047Q3US59 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.79□□□□□ -0.2
Gm28047Q3US59 Gm6013-201ENSMUST00000212264 699 ntBASIC13.79□□□□□ -0.2
Gm28047Q3US59 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.79□□□□□ -0.2
Gm28047Q3US59 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.79□□□□□ -0.2
Gm28047Q3US59 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gm28047Q3US59 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gm28047Q3US59 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm28047Q3US59 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms