Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.89□□□□□ -0.35
Trim43aQ3TL54 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43aQ3TL54 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43aQ3TL54 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43aQ3TL54 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim43aQ3TL54 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43aQ3TL54 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Trim43aQ3TL54 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43aQ3TL54 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43aQ3TL54 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim43aQ3TL54 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.89□□□□□ -0.35
Trim43aQ3TL54 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43aQ3TL54 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43aQ3TL54 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43aQ3TL54 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43aQ3TL54 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
Trim43aQ3TL54 Gm12036-201ENSMUST00000120008 530 ntBASIC12.89□□□□□ -0.35
Trim43aQ3TL54 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43aQ3TL54 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.89□□□□□ -0.35
Trim43aQ3TL54 Gm7029-201ENSMUST00000173226 450 ntBASIC12.89□□□□□ -0.35
Trim43aQ3TL54 Gm4271-201ENSMUST00000174444 973 ntBASIC12.89□□□□□ -0.35
Trim43aQ3TL54 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim43aQ3TL54 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.89□□□□□ -0.35
Trim43aQ3TL54 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.89□□□□□ -0.35
Trim43aQ3TL54 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43aQ3TL54 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43aQ3TL54 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43aQ3TL54 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trim43aQ3TL54 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43aQ3TL54 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trim43aQ3TL54 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trim43aQ3TL54 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43aQ3TL54 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43aQ3TL54 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trim43aQ3TL54 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43aQ3TL54 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43aQ3TL54 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43aQ3TL54 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.89□□□□□ -0.35
Trim43aQ3TL54 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim43aQ3TL54 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim43aQ3TL54 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43aQ3TL54 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Gm12314-201ENSMUST00000118104 538 ntBASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Gm44958-201ENSMUST00000203734 736 ntBASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Gm29705-201ENSMUST00000212598 474 ntBASIC12.88□□□□□ -0.35
Trim43aQ3TL54 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trim43aQ3TL54 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43aQ3TL54 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trim43aQ3TL54 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim43aQ3TL54 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43aQ3TL54 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43aQ3TL54 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43aQ3TL54 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43aQ3TL54 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trim43aQ3TL54 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43aQ3TL54 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trim43aQ3TL54 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.87□□□□□ -0.35
Trim43aQ3TL54 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.87□□□□□ -0.35
Trim43aQ3TL54 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43aQ3TL54 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Trim43aQ3TL54 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43aQ3TL54 Gm43630-201ENSMUST00000201550 776 ntBASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms