Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC13.14□□□□□ -0.31
Col9a2Q07643 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.14□□□□□ -0.31
Col9a2Q07643 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Col9a2Q07643 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a2Q07643 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a2Q07643 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a2Q07643 Gm9796-201ENSMUST00000062249 2250 ntBASIC13.14□□□□□ -0.31
Col9a2Q07643 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a2Q07643 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Col9a2Q07643 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a2Q07643 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a2Q07643 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Col9a2Q07643 Gm13408-201ENSMUST00000119822 798 ntBASIC13.14□□□□□ -0.31
Col9a2Q07643 Gm13935-201ENSMUST00000121859 798 ntBASIC13.14□□□□□ -0.31
Col9a2Q07643 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.14□□□□□ -0.31
Col9a2Q07643 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a2Q07643 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a2Q07643 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a2Q07643 Gm8285-201ENSMUST00000208293 759 ntBASIC13.14□□□□□ -0.31
Col9a2Q07643 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC13.14□□□□□ -0.31
Col9a2Q07643 Gm4797-201ENSMUST00000219075 1283 ntBASIC13.14□□□□□ -0.31
Col9a2Q07643 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13.14□□□□□ -0.31
Col9a2Q07643 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Col9a2Q07643 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a2Q07643 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a2Q07643 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Col9a2Q07643 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Col9a2Q07643 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Col9a2Q07643 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Col9a2Q07643 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Col9a2Q07643 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.14□□□□□ -0.31
Col9a2Q07643 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a2Q07643 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.14□□□□□ -0.31
Col9a2Q07643 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Col9a2Q07643 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a2Q07643 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a2Q07643 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Col9a2Q07643 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Col9a2Q07643 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a2Q07643 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a2Q07643 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col9a2Q07643 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col9a2Q07643 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col9a2Q07643 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col9a2Q07643 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col9a2Q07643 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Col9a2Q07643 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col9a2Q07643 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col9a2Q07643 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col9a2Q07643 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Col9a2Q07643 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col9a2Q07643 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Col9a2Q07643 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.13□□□□□ -0.31
Col9a2Q07643 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Col9a2Q07643 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col9a2Q07643 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.13□□□□□ -0.31
Col9a2Q07643 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col9a2Q07643 Gm44152-201ENSMUST00000205007 1691 ntBASIC13.13□□□□□ -0.31
Col9a2Q07643 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.13□□□□□ -0.31
Col9a2Q07643 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col9a2Q07643 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col9a2Q07643 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col9a2Q07643 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Col9a2Q07643 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col9a2Q07643 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Col9a2Q07643 Gm12579-201ENSMUST00000118040 783 ntBASIC13.13□□□□□ -0.31
Col9a2Q07643 Gm15432-201ENSMUST00000121106 195 ntBASIC13.13□□□□□ -0.31
Col9a2Q07643 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC13.13□□□□□ -0.31
Col9a2Q07643 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC13.13□□□□□ -0.31
Col9a2Q07643 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Col9a2Q07643 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col9a2Q07643 Gm37835-201ENSMUST00000193305 361 ntBASIC13.13□□□□□ -0.31
Col9a2Q07643 Gm8956-201ENSMUST00000203939 825 ntBASIC13.13□□□□□ -0.31
Col9a2Q07643 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Col9a2Q07643 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC13.13□□□□□ -0.31
Col9a2Q07643 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col9a2Q07643 Gm5705-201ENSMUST00000066241 711 ntBASIC13.13□□□□□ -0.31
Col9a2Q07643 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Col9a2Q07643 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col9a2Q07643 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
Col9a2Q07643 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Col9a2Q07643 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col9a2Q07643 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col9a2Q07643 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Col9a2Q07643 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col9a2Q07643 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col9a2Q07643 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col9a2Q07643 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col9a2Q07643 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col9a2Q07643 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col9a2Q07643 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col9a2Q07643 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.12□□□□□ -0.31
Col9a2Q07643 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col9a2Q07643 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.12□□□□□ -0.31
Col9a2Q07643 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col9a2Q07643 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col9a2Q07643 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col9a2Q07643 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col9a2Q07643 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Col9a2Q07643 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms