Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13□□□□□ -0.33
VcpQ01853 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
VcpQ01853 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
VcpQ01853 Gm7789-202ENSMUST00000211273 1400 ntBASIC13□□□□□ -0.33
VcpQ01853 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
VcpQ01853 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
VcpQ01853 Gm13047-201ENSMUST00000117116 815 ntBASIC13□□□□□ -0.33
VcpQ01853 Gm11675-201ENSMUST00000121873 832 ntBASIC13□□□□□ -0.33
VcpQ01853 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VcpQ01853 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
VcpQ01853 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
VcpQ01853 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13□□□□□ -0.33
VcpQ01853 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13□□□□□ -0.33
VcpQ01853 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
VcpQ01853 Gm18893-201ENSMUST00000198416 943 ntBASIC13□□□□□ -0.33
VcpQ01853 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13□□□□□ -0.33
VcpQ01853 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13□□□□□ -0.33
VcpQ01853 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13□□□□□ -0.33
VcpQ01853 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13□□□□□ -0.33
VcpQ01853 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VcpQ01853 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
VcpQ01853 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VcpQ01853 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
VcpQ01853 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
VcpQ01853 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
VcpQ01853 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
VcpQ01853 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
VcpQ01853 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
VcpQ01853 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
VcpQ01853 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
VcpQ01853 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
VcpQ01853 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13□□□□□ -0.33
VcpQ01853 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VcpQ01853 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
VcpQ01853 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
VcpQ01853 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VcpQ01853 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VcpQ01853 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
VcpQ01853 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
VcpQ01853 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VcpQ01853 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VcpQ01853 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VcpQ01853 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VcpQ01853 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VcpQ01853 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VcpQ01853 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VcpQ01853 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VcpQ01853 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.99□□□□□ -0.33
VcpQ01853 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC12.99□□□□□ -0.33
VcpQ01853 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
VcpQ01853 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VcpQ01853 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
VcpQ01853 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.99□□□□□ -0.33
VcpQ01853 Gm7600-201ENSMUST00000209657 785 ntBASIC12.99□□□□□ -0.33
VcpQ01853 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.99□□□□□ -0.33
VcpQ01853 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC12.99□□□□□ -0.33
VcpQ01853 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.99□□□□□ -0.33
VcpQ01853 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.99□□□□□ -0.33
VcpQ01853 Gm8712-201ENSMUST00000221090 701 ntBASIC12.99□□□□□ -0.33
VcpQ01853 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.99□□□□□ -0.33
VcpQ01853 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.99□□□□□ -0.33
VcpQ01853 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VcpQ01853 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.99□□□□□ -0.33
VcpQ01853 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VcpQ01853 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VcpQ01853 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VcpQ01853 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VcpQ01853 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VcpQ01853 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VcpQ01853 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VcpQ01853 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VcpQ01853 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
VcpQ01853 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VcpQ01853 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
VcpQ01853 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
VcpQ01853 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
VcpQ01853 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
VcpQ01853 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
VcpQ01853 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VcpQ01853 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VcpQ01853 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.98□□□□□ -0.33
VcpQ01853 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VcpQ01853 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VcpQ01853 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VcpQ01853 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VcpQ01853 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VcpQ01853 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VcpQ01853 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VcpQ01853 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VcpQ01853 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.98□□□□□ -0.33
VcpQ01853 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VcpQ01853 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VcpQ01853 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.98□□□□□ -0.33
VcpQ01853 Gm24749-201ENSMUST00000157838 343 ntBASIC12.98□□□□□ -0.33
VcpQ01853 Gm17040-202ENSMUST00000170597 889 ntBASIC12.98□□□□□ -0.33
VcpQ01853 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.98□□□□□ -0.33
VcpQ01853 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.98□□□□□ -0.33
VcpQ01853 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.98□□□□□ -0.33
VcpQ01853 AC124457.1-201ENSMUST00000198845 120 ntBASIC12.98□□□□□ -0.33
VcpQ01853 Gm44651-201ENSMUST00000207343 372 ntBASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms