Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc1P97496 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc1P97496 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc1P97496 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc1P97496 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc1P97496 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc1P97496 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Smarcc1P97496 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc1P97496 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc1P97496 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC15.19■□□□□ 0.02
Smarcc1P97496 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc1P97496 Gm3551-201ENSMUST00000190750 664 ntBASIC15.19■□□□□ 0.02
Smarcc1P97496 Gm45120-201ENSMUST00000208880 408 ntBASIC15.19■□□□□ 0.02
Smarcc1P97496 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC15.19■□□□□ 0.02
Smarcc1P97496 Gm9661-201ENSMUST00000221611 1122 ntBASIC15.19■□□□□ 0.02
Smarcc1P97496 Gm19009-201ENSMUST00000223072 823 ntBASIC15.19■□□□□ 0.02
Smarcc1P97496 CT025553.1-201ENSMUST00000226292 299 ntBASIC15.19■□□□□ 0.02
Smarcc1P97496 Gm5879-201ENSMUST00000089501 1209 ntBASIC15.19■□□□□ 0.02
Smarcc1P97496 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc1P97496 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc1P97496 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc1P97496 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc1P97496 Gm18198-201ENSMUST00000204986 1551 ntBASIC15.19■□□□□ 0.02
Smarcc1P97496 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc1P97496 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc1P97496 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcc1P97496 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcc1P97496 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcc1P97496 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcc1P97496 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcc1P97496 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcc1P97496 Gm10176-201ENSMUST00000159707 2264 ntBASIC15.18■□□□□ 0.02
Smarcc1P97496 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcc1P97496 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcc1P97496 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcc1P97496 Gm6210-201ENSMUST00000204734 1942 ntBASIC15.18■□□□□ 0.02
Smarcc1P97496 Gm25076-201ENSMUST00000104098 132 ntBASIC15.18■□□□□ 0.02
Smarcc1P97496 Gm16166-201ENSMUST00000118291 787 ntBASIC15.18■□□□□ 0.02
Smarcc1P97496 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcc1P97496 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC15.18■□□□□ 0.02
Smarcc1P97496 Gm4310-201ENSMUST00000177847 889 ntBASIC15.18■□□□□ 0.02
Smarcc1P97496 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcc1P97496 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC15.18■□□□□ 0.02
Smarcc1P97496 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcc1P97496 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Smarcc1P97496 Gm17889-201ENSMUST00000198410 598 ntBASIC15.18■□□□□ 0.02
Smarcc1P97496 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Smarcc1P97496 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Smarcc1P97496 AC165260.2-203ENSMUST00000224237 336 ntBASIC15.18■□□□□ 0.02
Smarcc1P97496 AC156501.1-201ENSMUST00000228219 270 ntBASIC15.18■□□□□ 0.02
Smarcc1P97496 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcc1P97496 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Smarcc1P97496 Gm3052-202ENSMUST00000188254 2224 ntBASIC15.18■□□□□ 0.02
Smarcc1P97496 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcc1P97496 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcc1P97496 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC15.18■□□□□ 0.02
Smarcc1P97496 Gm37644-201ENSMUST00000192190 2270 ntBASIC15.18■□□□□ 0.02
Smarcc1P97496 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC15.18■□□□□ 0.02
Smarcc1P97496 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC15.18■□□□□ 0.02
Smarcc1P97496 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcc1P97496 Gm9361-201ENSMUST00000198695 1507 ntBASIC15.17■□□□□ 0.02
Smarcc1P97496 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcc1P97496 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Smarcc1P97496 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Smarcc1P97496 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Smarcc1P97496 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcc1P97496 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcc1P97496 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcc1P97496 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcc1P97496 Gm7114-201ENSMUST00000190159 1789 ntBASIC15.17■□□□□ 0.02
Smarcc1P97496 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcc1P97496 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcc1P97496 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Smarcc1P97496 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcc1P97496 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC15.17■□□□□ 0.02
Smarcc1P97496 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC15.17■□□□□ 0.02
Smarcc1P97496 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC15.17■□□□□ 0.02
Smarcc1P97496 Gm22877-201ENSMUST00000175451 105 ntBASIC15.17■□□□□ 0.02
Smarcc1P97496 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Smarcc1P97496 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcc1P97496 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcc1P97496 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC15.17■□□□□ 0.02
Smarcc1P97496 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC15.17■□□□□ 0.02
Smarcc1P97496 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcc1P97496 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcc1P97496 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Smarcc1P97496 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcc1P97496 Gm5380-201ENSMUST00000119296 2136 ntBASIC15.17■□□□□ 0.02
Smarcc1P97496 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcc1P97496 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcc1P97496 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcc1P97496 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Smarcc1P97496 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc1P97496 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc1P97496 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc1P97496 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc1P97496 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc1P97496 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc1P97496 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc1P97496 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms