Protein–RNA interactions for Protein: P97350

Pkp1, Plakophilin-1, mousemouse

Known RBP Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp1P97350 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pkp1P97350 Gm5070-201ENSMUST00000177599 862 ntBASIC14.17□□□□□ -0.14
Pkp1P97350 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.17□□□□□ -0.14
Pkp1P97350 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC14.17□□□□□ -0.14
Pkp1P97350 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.17□□□□□ -0.14
Pkp1P97350 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.17□□□□□ -0.14
Pkp1P97350 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkp1P97350 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkp1P97350 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkp1P97350 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkp1P97350 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkp1P97350 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pkp1P97350 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkp1P97350 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pkp1P97350 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkp1P97350 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC14.17□□□□□ -0.14
Pkp1P97350 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkp1P97350 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Pkp1P97350 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Pkp1P97350 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp1P97350 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp1P97350 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp1P97350 AC126257.1-201ENSMUST00000213195 1536 ntBASIC14.16□□□□□ -0.14
Pkp1P97350 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp1P97350 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp1P97350 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Pkp1P97350 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Pkp1P97350 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC14.16□□□□□ -0.14
Pkp1P97350 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Pkp1P97350 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp1P97350 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp1P97350 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp1P97350 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp1P97350 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.16□□□□□ -0.14
Pkp1P97350 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC14.16□□□□□ -0.14
Pkp1P97350 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp1P97350 Gm3096-201ENSMUST00000185770 364 ntBASIC14.16□□□□□ -0.14
Pkp1P97350 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp1P97350 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC14.16□□□□□ -0.14
Pkp1P97350 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp1P97350 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp1P97350 Gzmn-202ENSMUST00000225535 989 ntBASIC14.16□□□□□ -0.14
Pkp1P97350 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp1P97350 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.16□□□□□ -0.14
Pkp1P97350 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp1P97350 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Pkp1P97350 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp1P97350 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Pkp1P97350 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Pkp1P97350 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp1P97350 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp1P97350 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Pkp1P97350 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp1P97350 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pkp1P97350 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Pkp1P97350 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pkp1P97350 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Pkp1P97350 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pkp1P97350 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Pkp1P97350 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pkp1P97350 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pkp1P97350 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pkp1P97350 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pkp1P97350 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pkp1P97350 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Pkp1P97350 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.15□□□□□ -0.14
Pkp1P97350 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pkp1P97350 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pkp1P97350 Gm11930-201ENSMUST00000117788 190 ntBASIC14.15□□□□□ -0.14
Pkp1P97350 Gm5419-201ENSMUST00000119301 527 ntBASIC14.15□□□□□ -0.14
Pkp1P97350 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC14.15□□□□□ -0.14
Pkp1P97350 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC14.15□□□□□ -0.14
Pkp1P97350 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC14.15□□□□□ -0.14
Pkp1P97350 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pkp1P97350 Gm18893-201ENSMUST00000198416 943 ntBASIC14.15□□□□□ -0.14
Pkp1P97350 Gm43758-201ENSMUST00000199500 367 ntBASIC14.15□□□□□ -0.14
Pkp1P97350 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.15□□□□□ -0.14
Pkp1P97350 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pkp1P97350 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pkp1P97350 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pkp1P97350 AC154639.1-201ENSMUST00000224393 2849 ntBASIC14.15□□□□□ -0.14
Pkp1P97350 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pkp1P97350 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Pkp1P97350 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pkp1P97350 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pkp1P97350 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pkp1P97350 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pkp1P97350 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pkp1P97350 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC14.15□□□□□ -0.14
Pkp1P97350 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
Pkp1P97350 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pkp1P97350 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Pkp1P97350 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pkp1P97350 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.14□□□□□ -0.15
Pkp1P97350 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pkp1P97350 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pkp1P97350 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pkp1P97350 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
Pkp1P97350 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pkp1P97350 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms