Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 AC137871.1-201ENSMUST00000228278 475 ntBASIC7.98□□□□□ -1.13
PrkdcP97313 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
PrkdcP97313 Gm9701-201ENSMUST00000077976 427 ntBASIC7.98□□□□□ -1.13
PrkdcP97313 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
PrkdcP97313 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
PrkdcP97313 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
PrkdcP97313 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
PrkdcP97313 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
PrkdcP97313 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
PrkdcP97313 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
PrkdcP97313 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
PrkdcP97313 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
PrkdcP97313 Gm8111-201ENSMUST00000117659 987 ntBASIC7.97□□□□□ -1.13
PrkdcP97313 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC7.97□□□□□ -1.13
PrkdcP97313 Gm7928-201ENSMUST00000181249 701 ntBASIC7.97□□□□□ -1.13
PrkdcP97313 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Mir7051-201ENSMUST00000184167 73 ntBASIC7.97□□□□□ -1.13
PrkdcP97313 Ighv5-1-201ENSMUST00000193324 353 ntBASIC7.97□□□□□ -1.13
PrkdcP97313 Gm29328-212ENSMUST00000209182 1168 ntTSL 5 BASIC7.97□□□□□ -1.13
PrkdcP97313 Gm34397-201ENSMUST00000213192 708 ntTSL 3 BASIC7.97□□□□□ -1.13
PrkdcP97313 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
PrkdcP97313 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
PrkdcP97313 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
PrkdcP97313 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC7.97□□□□□ -1.13
PrkdcP97313 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC7.97□□□□□ -1.13
PrkdcP97313 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
PrkdcP97313 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Gm22937-201ENSMUST00000103954 131 ntBASIC7.97□□□□□ -1.13
PrkdcP97313 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC7.97□□□□□ -1.13
PrkdcP97313 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
PrkdcP97313 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 AC158636.1-201ENSMUST00000220118 1393 ntBASIC7.97□□□□□ -1.13
PrkdcP97313 Sybu-209ENSMUST00000228639 4113 ntBASIC7.97□□□□□ -1.13
PrkdcP97313 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Gm5385-201ENSMUST00000118988 1559 ntBASIC7.97□□□□□ -1.13
PrkdcP97313 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
PrkdcP97313 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC7.97□□□□□ -1.13
PrkdcP97313 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC7.97□□□□□ -1.13
PrkdcP97313 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC7.97□□□□□ -1.13
PrkdcP97313 Mir3091-201ENSMUST00000175086 76 ntBASIC7.97□□□□□ -1.13
PrkdcP97313 Gm25591-201ENSMUST00000177317 94 ntBASIC7.97□□□□□ -1.13
PrkdcP97313 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
PrkdcP97313 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC7.97□□□□□ -1.13
PrkdcP97313 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
PrkdcP97313 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Gm21577-201ENSMUST00000190823 697 ntBASIC7.97□□□□□ -1.13
PrkdcP97313 Gm20802-201ENSMUST00000190832 698 ntBASIC7.97□□□□□ -1.13
PrkdcP97313 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
PrkdcP97313 Gm19228-201ENSMUST00000214030 717 ntBASIC7.97□□□□□ -1.13
PrkdcP97313 AC115304.2-201ENSMUST00000226399 332 ntBASIC7.97□□□□□ -1.13
PrkdcP97313 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
PrkdcP97313 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 AC241621.2-201ENSMUST00000223991 2151 ntBASIC7.97□□□□□ -1.13
PrkdcP97313 Gm6024-201ENSMUST00000117850 1558 ntBASIC7.97□□□□□ -1.13
PrkdcP97313 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
PrkdcP97313 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC7.97□□□□□ -1.13
PrkdcP97313 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC7.97□□□□□ -1.13
PrkdcP97313 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
PrkdcP97313 Gm42660-201ENSMUST00000197733 947 ntBASIC7.97□□□□□ -1.13
PrkdcP97313 BB187690-201ENSMUST00000198619 1176 ntBASIC7.97□□□□□ -1.13
PrkdcP97313 Gm44540-201ENSMUST00000205640 354 ntBASIC7.97□□□□□ -1.13
PrkdcP97313 Gm44882-201ENSMUST00000205702 802 ntBASIC7.97□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms