Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
H3f3aP84244 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
H3f3aP84244 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
H3f3aP84244 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
H3f3aP84244 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
H3f3aP84244 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
H3f3aP84244 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H3f3aP84244 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H3f3aP84244 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H3f3aP84244 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.83□□□□□ -0.68
H3f3aP84244 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
H3f3aP84244 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
H3f3aP84244 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H3f3aP84244 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
H3f3aP84244 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H3f3aP84244 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H3f3aP84244 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H3f3aP84244 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
H3f3aP84244 Gm37324-201ENSMUST00000194500 4504 ntBASIC10.83□□□□□ -0.68
H3f3aP84244 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
H3f3aP84244 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H3f3aP84244 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
H3f3aP84244 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H3f3aP84244 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
H3f3aP84244 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC10.83□□□□□ -0.68
H3f3aP84244 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
H3f3aP84244 Mir6420-201ENSMUST00000185032 102 ntBASIC10.83□□□□□ -0.68
H3f3aP84244 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC10.83□□□□□ -0.68
H3f3aP84244 Gm45598-202ENSMUST00000210719 986 ntBASIC10.83□□□□□ -0.68
H3f3aP84244 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.83□□□□□ -0.68
H3f3aP84244 Gzmn-202ENSMUST00000225535 989 ntBASIC10.83□□□□□ -0.68
H3f3aP84244 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H3f3aP84244 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H3f3aP84244 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
H3f3aP84244 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H3f3aP84244 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H3f3aP84244 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
H3f3aP84244 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
H3f3aP84244 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
H3f3aP84244 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
H3f3aP84244 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
H3f3aP84244 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
H3f3aP84244 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H3f3aP84244 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.83□□□□□ -0.68
H3f3aP84244 Gm45495-201ENSMUST00000200940 1700 ntBASIC10.83□□□□□ -0.68
H3f3aP84244 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
H3f3aP84244 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
H3f3aP84244 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H3f3aP84244 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H3f3aP84244 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H3f3aP84244 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
H3f3aP84244 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H3f3aP84244 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H3f3aP84244 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H3f3aP84244 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H3f3aP84244 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
H3f3aP84244 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.83□□□□□ -0.68
H3f3aP84244 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
H3f3aP84244 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H3f3aP84244 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
H3f3aP84244 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
H3f3aP84244 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
H3f3aP84244 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
H3f3aP84244 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
H3f3aP84244 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.82□□□□□ -0.68
H3f3aP84244 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
H3f3aP84244 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.82□□□□□ -0.68
H3f3aP84244 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 Gm11989-201ENSMUST00000117240 672 ntBASIC10.82□□□□□ -0.68
H3f3aP84244 Gm11362-201ENSMUST00000118838 850 ntBASIC10.82□□□□□ -0.68
H3f3aP84244 Gm13665-201ENSMUST00000120830 528 ntBASIC10.82□□□□□ -0.68
H3f3aP84244 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.82□□□□□ -0.68
H3f3aP84244 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.82□□□□□ -0.68
H3f3aP84244 Gm32999-201ENSMUST00000192693 562 ntBASIC10.82□□□□□ -0.68
H3f3aP84244 Ighv1-62-201ENSMUST00000193406 350 ntBASIC10.82□□□□□ -0.68
H3f3aP84244 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
H3f3aP84244 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.82□□□□□ -0.68
H3f3aP84244 Gm44967-201ENSMUST00000207047 631 ntBASIC10.82□□□□□ -0.68
H3f3aP84244 Gm6082-201ENSMUST00000215204 454 ntBASIC10.82□□□□□ -0.68
H3f3aP84244 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms