Protein–RNA interactions for Protein: P68404

Prkcb, Protein kinase C beta type, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcbP68404 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PrkcbP68404 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
PrkcbP68404 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
PrkcbP68404 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PrkcbP68404 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
PrkcbP68404 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
PrkcbP68404 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
PrkcbP68404 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PrkcbP68404 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
PrkcbP68404 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.12□□□□□ -0.31
PrkcbP68404 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
PrkcbP68404 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.12□□□□□ -0.31
PrkcbP68404 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.12□□□□□ -0.31
PrkcbP68404 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PrkcbP68404 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PrkcbP68404 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.12□□□□□ -0.31
PrkcbP68404 Gm43184-201ENSMUST00000197247 542 ntBASIC13.12□□□□□ -0.31
PrkcbP68404 Gm3786-201ENSMUST00000202659 378 ntBASIC13.12□□□□□ -0.31
PrkcbP68404 Gm8956-201ENSMUST00000203939 825 ntBASIC13.12□□□□□ -0.31
PrkcbP68404 Gm270-201ENSMUST00000223010 976 ntBASIC13.12□□□□□ -0.31
PrkcbP68404 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
PrkcbP68404 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PrkcbP68404 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PrkcbP68404 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.12□□□□□ -0.31
PrkcbP68404 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PrkcbP68404 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PrkcbP68404 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PrkcbP68404 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PrkcbP68404 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PrkcbP68404 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PrkcbP68404 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PrkcbP68404 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.12□□□□□ -0.31
PrkcbP68404 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PrkcbP68404 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.12□□□□□ -0.31
PrkcbP68404 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PrkcbP68404 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
PrkcbP68404 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
PrkcbP68404 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
PrkcbP68404 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC13.11□□□□□ -0.31
PrkcbP68404 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PrkcbP68404 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PrkcbP68404 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
PrkcbP68404 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
PrkcbP68404 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PrkcbP68404 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PrkcbP68404 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PrkcbP68404 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.11□□□□□ -0.31
PrkcbP68404 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PrkcbP68404 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PrkcbP68404 Gm26286-201ENSMUST00000104166 134 ntBASIC13.11□□□□□ -0.31
PrkcbP68404 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
PrkcbP68404 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
PrkcbP68404 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC13.11□□□□□ -0.31
PrkcbP68404 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC13.11□□□□□ -0.31
PrkcbP68404 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PrkcbP68404 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC13.11□□□□□ -0.31
PrkcbP68404 Mir5120-201ENSMUST00000175020 78 ntBASIC13.11□□□□□ -0.31
PrkcbP68404 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
PrkcbP68404 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PrkcbP68404 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC13.11□□□□□ -0.31
PrkcbP68404 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.11□□□□□ -0.31
PrkcbP68404 Gm18893-201ENSMUST00000198416 943 ntBASIC13.11□□□□□ -0.31
PrkcbP68404 Gm43138-201ENSMUST00000199123 708 ntBASIC13.11□□□□□ -0.31
PrkcbP68404 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
PrkcbP68404 AU022133-201ENSMUST00000200601 873 ntBASIC13.11□□□□□ -0.31
PrkcbP68404 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
PrkcbP68404 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC13.11□□□□□ -0.31
PrkcbP68404 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PrkcbP68404 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PrkcbP68404 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
PrkcbP68404 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
PrkcbP68404 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PrkcbP68404 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.11□□□□□ -0.31
PrkcbP68404 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
PrkcbP68404 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PrkcbP68404 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PrkcbP68404 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
PrkcbP68404 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PrkcbP68404 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PrkcbP68404 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.11□□□□□ -0.31
PrkcbP68404 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
PrkcbP68404 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
PrkcbP68404 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
PrkcbP68404 Gm43289-201ENSMUST00000200537 1475 ntBASIC13.1□□□□□ -0.31
PrkcbP68404 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
PrkcbP68404 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PrkcbP68404 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PrkcbP68404 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PrkcbP68404 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
PrkcbP68404 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PrkcbP68404 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
PrkcbP68404 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PrkcbP68404 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.1□□□□□ -0.31
PrkcbP68404 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PrkcbP68404 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
PrkcbP68404 Gm6189-201ENSMUST00000164487 2082 ntBASIC13.1□□□□□ -0.31
PrkcbP68404 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PrkcbP68404 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
PrkcbP68404 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PrkcbP68404 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms